| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2304 |
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| Symbol | |
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| ID | 4688404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2443789 |
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| End bp | 2444979 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639835315 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_982533 |
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| Protein GI | 121605204 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGAAAA AAACAGTCTG GATGCTGATC GCCGCCGCAG GCGTTGCGGC CCTGGCGCTG
GCCTGGGCAT TTGCACCGCG TGCCATCGAG GTCGAGGTGG CAGCGGTCAC GCAGGGCCGT
TTCGAGCAGT CGATTGAAGA GGACGGCCGC ACCCGCCTGA TAGAGCGCTA CACGATTTCA
GCCCCGGTAT CGGCGCGCCT GTCGCGCATC ACGCTGCGCG AAGGCGACAC CGTCACGGCC
GGCGACACCG TGGCGGTGCT GACGCCGCTG ATGTCGCCCA TGGTCGATGA GCGCAGCCGG
CGCGAAGCCC AGGCGCGGCT GCAGTCGGCC ATGGCCGGGG TCGAGCGCGC GACAGCCCGG
ATCGCCCGCG CCGAGGTTTC GCTGCAGGAG GCCGGGCTGG AAATGCAGCG CACGAGCCGG
CTGGCTGACG AGGGCTTTGT ATCGCCTTCG CGCCTGGACA CCGTTCGCCT GGCCTTGGCA
GCCGCCCGGC GCGAGATGGA GGTCGCCCGT GCCGAACGCG ACATCGCCCG GCATGAGCAG
GCCCAGGCCA GCGCCGCGCT GATGCCGGCC GCAGCCAGCG CCCAAAGCGG CCGCCCGTTC
GCCGTGCGGT CGCCGGTCAG CGGCCGGGTG CTGCGAATCC CGCAGCCGAG CGAAGCCACC
ATCGCCGCCG GCGCTGCCCT GCTCGACGTT GGCGACCCCG CGCGCATGGA AGTGGTCAGC
GAGTTGCTGA CCACCGATGC GGTGAAGGCC AGTCCCGGCT TGCGGGTGGT GATCGAGCGC
TGGGGTGGAC CGCCCGTCGA AGGCCGGGTT CGCCGCGTGG AGCCGGCTGC GTTCACCAAG
GTTTCCGCCC TGGGCATTGA AGAGCAGCGG GTCAACGTGC TGATCGACAT TGCCGATCCG
CCGCAAGCCT GGCGCGCCAT GGGCGATGGG TTCCGGGTCG GGGTGAGGAT CGTCACGGCC
AGCACCGACC AGGCGGTGCT GGTTCCGGTC GGGGCCTTGT TTCCCCATGG CGAGGCCATG
GCAGCCTACC GGCTGGAGGC CGGAAAGGCG CGCCTGCAGG CGGTGGAGGT GGCAGCGCGC
AACGCCACCA TGGCCTCGGT GCGCAAAGGG CTGGCGCCAG GCCAGACGGT GGTGGTCTAT
CCGCCGGCAA CCCTGGCCGA TGGCCGAAGC ATTCGGGTGC GCAGGCCTTG A
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| Protein sequence | MQKKTVWMLI AAAGVAALAL AWAFAPRAIE VEVAAVTQGR FEQSIEEDGR TRLIERYTIS
APVSARLSRI TLREGDTVTA GDTVAVLTPL MSPMVDERSR REAQARLQSA MAGVERATAR
IARAEVSLQE AGLEMQRTSR LADEGFVSPS RLDTVRLALA AARREMEVAR AERDIARHEQ
AQASAALMPA AASAQSGRPF AVRSPVSGRV LRIPQPSEAT IAAGAALLDV GDPARMEVVS
ELLTTDAVKA SPGLRVVIER WGGPPVEGRV RRVEPAAFTK VSALGIEEQR VNVLIDIADP
PQAWRAMGDG FRVGVRIVTA STDQAVLVPV GALFPHGEAM AAYRLEAGKA RLQAVEVAAR
NATMASVRKG LAPGQTVVVY PPATLADGRS IRVRRP
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