Gene Pnap_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2298 
Symbol 
ID4687208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2437771 
End bp2438265 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content65% 
IMG OID639835309 
ProductUspA domain-containing protein 
Protein accessionYP_982527 
Protein GI121605198 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.178234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCTT CAACCCAGGA GCCCTCCATG CCCAGCTTTC ACCAGATTCT TGTGCCGGTT 
GACGGCAGTC CCCCTTCGGA AAAGGCGCTG GATGAAGCCA TCCGGCTGGC CCGGCTGAAC
GGCGCGCGCC TGACGCTGCT TCATGTCGTC GATGAAATGG GCTACGTCAA CGGCTTCGAG
TCGGCCGTGA ACTACCTCAA CGACATCATT CCACTCATGC GCGTGGCAGG CGAAAAACTG
CTGGCGCACG ACCGGCAAAA GGCGCTTGAC CAGGGCGTGC AGGCGGACAG CGTGCTGATT
GACGAGGGAC CGGGCCGCAT TTGCGAGCAT GTGGCCGAAC AGGCGGCGCT CGCCAAGGCT
GACCTGATCG TCGTCGGCTC CCATGGCCGG CGCGGCATCG GGCGCCTGCT GCTGGGCAGT
GATGCCGAGC AGATTGTGCG GCACGCGCCG GTGCCCGTGC TGGTGGTCCG GGCGCCTGCT
GAAGCGAAGC CGTAG
 
Protein sequence
MPSSTQEPSM PSFHQILVPV DGSPPSEKAL DEAIRLARLN GARLTLLHVV DEMGYVNGFE 
SAVNYLNDII PLMRVAGEKL LAHDRQKALD QGVQADSVLI DEGPGRICEH VAEQAALAKA
DLIVVGSHGR RGIGRLLLGS DAEQIVRHAP VPVLVVRAPA EAKP