Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2289 |
Symbol | |
ID | 4687607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2430496 |
End bp | 2430897 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639835300 |
Product | scaffold protein |
Protein accession | YP_982518 |
Protein GI | 121605189 |
COG category | [C] Energy production and conversion |
COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
TIGRFAM ID | [TIGR01999] FeS cluster assembly scaffold IscU |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0320081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATACA GCGAAAAAGT GGTGGACCAC TATGAAAATC CCCGCAACGT CGGTTCTTTT GAAAAGGGCG ATGAAACGGT AGGTACCGGC ATGGTCGGCG CTCCGGCCTG CGGCGACGTG ATGAAGCTGC AGATCAAGGT CAATCCGATC ACGGGCGTGA TTGAAGATGC ACGTTTTAAA ACCTACGGTT GCGGCTCGGC GATTGCCTCC AGTTCGCTCG TCACCGAATG GGTGAAAGGC AAAACGCTGG ACCAGGCTGC CAGCATCAAG AACAGCGCGA TTGCCGAAGA ACTGGCACTG CCGCCCGTCA AGATTCATTG CTCCATCCTG GCCGAAGACG CCATCAAGGC GGCCGTGAAT GACTACAAGC AAAAGCACAG CATTGCCGAA GCCGCGCACT GA
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Protein sequence | MAYSEKVVDH YENPRNVGSF EKGDETVGTG MVGAPACGDV MKLQIKVNPI TGVIEDARFK TYGCGSAIAS SSLVTEWVKG KTLDQAASIK NSAIAEELAL PPVKIHCSIL AEDAIKAAVN DYKQKHSIAE AAH
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