Gene Pnap_2289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2289 
Symbol 
ID4687607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2430496 
End bp2430897 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content56% 
IMG OID639835300 
Productscaffold protein 
Protein accessionYP_982518 
Protein GI121605189 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01999] FeS cluster assembly scaffold IscU 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0320081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATACA GCGAAAAAGT GGTGGACCAC TATGAAAATC CCCGCAACGT CGGTTCTTTT 
GAAAAGGGCG ATGAAACGGT AGGTACCGGC ATGGTCGGCG CTCCGGCCTG CGGCGACGTG
ATGAAGCTGC AGATCAAGGT CAATCCGATC ACGGGCGTGA TTGAAGATGC ACGTTTTAAA
ACCTACGGTT GCGGCTCGGC GATTGCCTCC AGTTCGCTCG TCACCGAATG GGTGAAAGGC
AAAACGCTGG ACCAGGCTGC CAGCATCAAG AACAGCGCGA TTGCCGAAGA ACTGGCACTG
CCGCCCGTCA AGATTCATTG CTCCATCCTG GCCGAAGACG CCATCAAGGC GGCCGTGAAT
GACTACAAGC AAAAGCACAG CATTGCCGAA GCCGCGCACT GA
 
Protein sequence
MAYSEKVVDH YENPRNVGSF EKGDETVGTG MVGAPACGDV MKLQIKVNPI TGVIEDARFK 
TYGCGSAIAS SSLVTEWVKG KTLDQAASIK NSAIAEELAL PPVKIHCSIL AEDAIKAAVN
DYKQKHSIAE AAH