Gene Pnap_2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2288 
Symbol 
ID4687782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2430136 
End bp2430459 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content56% 
IMG OID639835299 
Productiron-sulfur cluster assembly protein IscA 
Protein accessionYP_982517 
Protein GI121605188 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR02011] iron-sulfur cluster assembly protein IscA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0828937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTA CCCTTACTGA CGCAGCCGCC CGCCACGTGA CCCGCTACAT GACCAAGCGC 
GGAAAAGGCG TGGGTGTACG CCTGGGCGTC AAGACCACTG GATGCTCTGG CTTGGCTTAC
AAGCTGGAGT ATGCCGATGA AATCGCACCT GAAGATGTCG TGTTTGAAGA CAACGGCGTG
AAGGTGCTGG TGGACCCCAA AAGCATGGCC TATATCGATG GCACCCAACT CGACTTTGTG
CGCGAAGGCT TGAACGAAGG CTTCAAGTTC ATCAATCCCA ATGAGCGTGA CCGCTGTGGG
TGCGGTGAGA GTTTTCGCGT TTGA
 
Protein sequence
MSVTLTDAAA RHVTRYMTKR GKGVGVRLGV KTTGCSGLAY KLEYADEIAP EDVVFEDNGV 
KVLVDPKSMA YIDGTQLDFV REGLNEGFKF INPNERDRCG CGESFRV