| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2287 |
|---|
| Symbol | |
|---|
| ID | 4687895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 2429520 |
|---|
| End bp | 2430038 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639835298 |
|---|
| Product | co-chaperone Hsc20 |
|---|
| Protein accession | YP_982516 |
|---|
| Protein GI | 121605187 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1076] DnaJ-domain-containing proteins 1 |
|---|
| TIGRFAM ID | [TIGR00714] Fe-S protein assembly co-chaperone HscB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.198647 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTTC AATCCAACGA TTTTGAGCTT TTTGGTATTT CCATGCAATT TGCCCAGGAC
CGTGCGCAAC TCGACGCACG CTGGAAGGAA TTGCAGCGCG AAGCCCATCC TGACAAGTTT
GCGGCGCAAG GTGCGGCGGC TCAGCGCGTG GCCATGCAGT GGTCGGTGCG TATCAACGAG
GCTTATCAGC GGCTGAAAGA TCCGCTTAAA CGCGCCAGCT ATTTATGCGA ACTGCACGGC
GCCCCCATCA ATGCCGAAAA CAACACCGCC ATGCCGTCAG ACTTCCTGAT GCAGCAGATG
GAATGGCGGG AAGCCCTGGA AGACGCTAAA AGCATTGACG ATTTGGAGAA AATAGCCTTG
GAGACTAATC TCAGCGGCCG TAAGCAGCTA TTAAAAATAG AGCAGGCTCT GGATAAAAAC
AAGAACTTCC CGATGGCGGC TCAGCAGGTC AGAAGCCTGA TGTTCATCGA ACGGTTTGCC
AGCGAGGTAG ATGCACGCAT CGACCAGCTG GGACAATAA
|
|---|
| Protein sequence | MNLQSNDFEL FGISMQFAQD RAQLDARWKE LQREAHPDKF AAQGAAAQRV AMQWSVRINE
AYQRLKDPLK RASYLCELHG APINAENNTA MPSDFLMQQM EWREALEDAK SIDDLEKIAL
ETNLSGRKQL LKIEQALDKN KNFPMAAQQV RSLMFIERFA SEVDARIDQL GQ
|
|---|
| |