| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2286 |
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| Symbol | hscA |
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| ID | 4686886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2427626 |
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| End bp | 2429488 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639835297 |
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| Product | chaperone protein HscA |
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| Protein accession | YP_982515 |
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| Protein GI | 121605186 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | [TIGR01991] Fe-S protein assembly chaperone HscA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.588837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTCC TGCAATTATC CGAACCCGGC CAGACGCCCG ACCCGCACCA GCGACGCATT
GCCATTGGCA TTGACCTGGG CACTACCCAT TCGCTGGTGG CCAGCGTGCG CAATGGGGTG
TCTGAATGCC TGCCTGATGC GCAGGGGCGA GTGCTGTTGC CCAGTGTTGT GCGTTATCTG
GAGGGTAGCC GTACGCAAAT CGGATTCGAT GCCTTGACCG CACAAGTCCA AGACCCATGC
AACACGATTT CCTCGGCCAA GCGCCTGATG GGGCGGGGCA TCAACGACAT CGGCAACCGC
GAGCACATGC CTTACCAGTT CATCGACAAG CCCGGCATGG TGACGCTGCA AACCGTTGCC
GGCGAAAAAA GCCCCGTTGA GGTCAGTGCC GAAATTCTGG CGTTGCTGCG CCAGCGCGCG
GAAGATACCT TTGACGATGA TATTTATGGC GCCGTGATCA CGGTGCCCGC CTATTTCGAC
GATGCACAGC GCCAGGCGAC CAAGGATGCG GCGCAACTGG CCCGATTGAA TGTGCTGCGC
CTGATCAACG AACCCACGGC GGCGGCCATT GCCTACGGAC TGGACAATGC CAGTGAAGGT
GTTTATGCGG TTTATGACCT TGGCGGTGGA ACTTTTGACA TTTCCATCCT GCGTTTGTCG
CAAGGCGTGT TCGAGGTGGT TTCCACGGGC GGCAACTCTG CCCTGGGTGG CGACGACTAT
GACCGCGCGC TTGTTGAGTG GACTCTGGCC AAAGCGGGCA TTGCTGCAGA CACGCTGACC
GCGTCCGACA AGGCGGCCTT GCAAAAGACA GCGCGGGCTT GCAAGGAGGC GTTGTCCGCT
GCATCCTCCG TGCCATTTTC AGTCCAACTG GCCAAGGCTT CCATCAACTT TGCAATGAAA
GCCGAAGATT TCGAGACCGC CTGCGCCCAT CTGACGCAGC GCACCATGAT GGCCGTGCGC
AAGGCCTTGC GTGACGCTGG CCTGGCGAAG GATGAGGTTC AGGGCGTCGT GATGGTGGGC
GGCTCGACCC GGATGCCGCA GGTGCGCAAA GCCGTGGCCA GTTTTTTTGG TTGCGAGCCG
CTGACCAACC TCAACCCCGA CGAGGTGGTG GCGCTGGGCG CCGCCATTTC GGCCAATCAG
CTGGCCGGCA ACAACACCGG CGCCGATTTG CTGCTGCTTG ACGTCATTCC ACTGTCGCTC
GGCATTGAAA CCATGGGTGG CCTGGTTGAG CGCATCGTGC CGCGCAACCA GACCATTCCC
ACGGCGATGG CGCAGGATTT CACCACCTAC CAGGACGGCC AGACGGCGCT GGCTCTGCAT
GTGGTTCAGG GCGAGCGCGA TCTGGTGGCC GACTGCCGCA GCCTGGCGCG TTTTGAATTG
CGCGGCATTC CGCCCATGGT GGCCGGTGCC GCGCGCATTC GCGTGACTTT CACGGTGGAC
GCCGACGGCC TGCTCAGCGT CAATGCCAAA GAGCAGATCA GCGGTGTCGA AGCGCATATT
GACGTGAAAC CATCCTATGG CCTGTCGGAC GATGAGATCG CCCGCATGCT GCAGGACAGT
TTTTCAACCG CCCAGCAAGA TATGCGGTCG CGCGCACTCG TTGAGGCGCA GGTGGATGCG
GACCGCATGA TACTGGCGAC TCAAAGCGCA CTGGCGGCTG ATGCGGACCT GCTCAACTCA
AGCGAGCGCG CCCAGATTGA CCGCTTGATG GCTGGCCTGG CCGATATGCG TGCAAATGGT
GATGCCGCCG CCATTGAAGC GGCAACCCAG GCACTTGCCA AAGGCACTGA GGCTTTTGCT
GCGCAGCGCA TGAACCGGGG CATTCAGAAA GCCCTGGCCG GGAAAAACAT CGAGTCGGTC
TGA
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| Protein sequence | MALLQLSEPG QTPDPHQRRI AIGIDLGTTH SLVASVRNGV SECLPDAQGR VLLPSVVRYL
EGSRTQIGFD ALTAQVQDPC NTISSAKRLM GRGINDIGNR EHMPYQFIDK PGMVTLQTVA
GEKSPVEVSA EILALLRQRA EDTFDDDIYG AVITVPAYFD DAQRQATKDA AQLARLNVLR
LINEPTAAAI AYGLDNASEG VYAVYDLGGG TFDISILRLS QGVFEVVSTG GNSALGGDDY
DRALVEWTLA KAGIAADTLT ASDKAALQKT ARACKEALSA ASSVPFSVQL AKASINFAMK
AEDFETACAH LTQRTMMAVR KALRDAGLAK DEVQGVVMVG GSTRMPQVRK AVASFFGCEP
LTNLNPDEVV ALGAAISANQ LAGNNTGADL LLLDVIPLSL GIETMGGLVE RIVPRNQTIP
TAMAQDFTTY QDGQTALALH VVQGERDLVA DCRSLARFEL RGIPPMVAGA ARIRVTFTVD
ADGLLSVNAK EQISGVEAHI DVKPSYGLSD DEIARMLQDS FSTAQQDMRS RALVEAQVDA
DRMILATQSA LAADADLLNS SERAQIDRLM AGLADMRANG DAAAIEAATQ ALAKGTEAFA
AQRMNRGIQK ALAGKNIESV
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