| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2283 |
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| Symbol | |
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| ID | 4688581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2425320 |
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| End bp | 2426315 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639835293 |
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| Product | phage integrase family protein |
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| Protein accession | YP_982512 |
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| Protein GI | 121605183 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATCT GGGAAGACGC AAAAGGTCGT AAACACATCG GCCTTATGGT CGGCGGCGAA
CGCATTCACC GAATCCTTCC GCAAGGTGCA ACTGCGGGTG ACGCCAAGCG CCTAGAAGCC
GAACTGCGCG GCGCGCTGAT CAAGGCGCCG CGCAGCGTCA ACATTCCGGG CGACCCGTCA
ATGTCATCGA TGCTGGGGAT TTACCTGGAG CATGCCAAAG GCCTGCGCAG CGCCACCACC
TCGGCACATC ACGCGTTGCG GCTCGGCCCA TGGGCCGAGA AGTACAAGGC CAGCCAGGCG
CGTGAATTTG CGGCGCACGT CATCAAGGAC ATGGGTGCGC TGCAAAAAGG ACCGGATGGA
AAGCTCAAGC CGGCCTATGC ACCGGCCACG ATCAACCGCA GCCTGGCCAC GGCCAAGAAG
GGCTTGGCGC TGGCCTGGGA AAGCAACCTG ATTCCGGAAA ACTACGGCCT GCGCATCAAG
AGCCTGAGCG TGAACAACAA GCGCGAGGTG TTTTTGAGCG TTGACCAGGT GCGCCAGATT
ACACAACATT GCACAGAGCA GGCGCAAGCG GCCATCTGGG CGGCGCTGCT GACGGGCGCC
AGGCGCGGCG AGATTTTCCA GATCCGGGCC GAGCACATCA AGGAAAACGA AATCATCGTT
CCGGCCAGTC ACACCAAGAC GCTGCGCAGC CGGGTGATTC CGATCATCCC TGCCCTGCGG
CCCTGGCTGG TGCATTTCCC GCTGACGATG ACGATCGATG GCGTGAAGTC GTCATGGCGC
CGGGCGCGGG TCAAGGCGGA CATGGAGCAC GTCAACTTCC ATGACCTGCG CCACTCTTGC
GCCAGCATCT TGATCGCGCT GGGGGTTGAT CTTTACACTG TGTCGAAAAT CCTCGGGCAC
AGCAACACGC AGACGACGCA GCGCTATGCG CACCTGCAAG TCGAGCAGCA GCGCGAAGCG
CTGAACAAGC TCGGGATGCT GGTGACTGCT GGGTGA
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| Protein sequence | MSIWEDAKGR KHIGLMVGGE RIHRILPQGA TAGDAKRLEA ELRGALIKAP RSVNIPGDPS
MSSMLGIYLE HAKGLRSATT SAHHALRLGP WAEKYKASQA REFAAHVIKD MGALQKGPDG
KLKPAYAPAT INRSLATAKK GLALAWESNL IPENYGLRIK SLSVNNKREV FLSVDQVRQI
TQHCTEQAQA AIWAALLTGA RRGEIFQIRA EHIKENEIIV PASHTKTLRS RVIPIIPALR
PWLVHFPLTM TIDGVKSSWR RARVKADMEH VNFHDLRHSC ASILIALGVD LYTVSKILGH
SNTQTTQRYA HLQVEQQREA LNKLGMLVTA G
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