| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2253 |
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| Symbol | |
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| ID | 4689710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2403419 |
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| End bp | 2405443 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639835263 |
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| Product | peptidase S14, ClpP |
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| Protein accession | YP_982482 |
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| Protein GI | 121605153 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0288659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAA AAGCAACTGC CTGGTATGCC ATTCGTCGCA AGACGGCCAT GGCTGCTGCC
GTGCTCGGCG TGGTGGCCGC AGCCGAGATC TACATCTACG GCGACATCGG CGAGTCCTGG
TACGAGGAAA CCGTATCGGC TGCCACGTTC GTCAAGGAGC TGAACGATAT CGACGCCACG
GCCATCACCG TGCGCATCAA CAGCATCGGC GGCTCGGTGC CCGATGGCCT GGCGATCTAC
AACGCGCTGC GCCGCCACAA GGCCGAAGTC ACCATTGAGA TCGACGGCAT GGCGCTGTCG
GTTGCCAGCC TGATCGCCAT GGCCGGCGAC AAAGTGAATA TGGCCAACAA CGCCATGCTC
ATGATCCATG GCCCCTGGTC CTATGTTTCT GGCAACAGCG TCGAGCTGCG CGACATGGCC
GACCAGCTCG ACACCTGGGC CGCTGCCATG TCCAACAGCT ACGCGGCCCG CACCGGCGAC
CAGCCGGCGA TGCTGGCTTT GCTCACCGAT GGCAAGGACC ACTTCTACAC CGCCGAGCAG
GCGCTCGCCG AGAAGTTTGT CGATGCCATC ACCGACCCGA TGCCCGTGTC CGCTTCTGCT
GCGCGGGATC TTCCCCTTAA CCGTTACCGC TCACTGCCTG CAGCTTTGCA GACAGCGAGC
ACTCTCGCGG CTGCCGCCGC ACCATCCCAG GAGCCTTTAA TGACAACCCC CAACTCGGCG
GCTACCCAAC CCCCCGCCGC CCCCGCCGCC TCCGCCGCCT CCGCCATTCT GGCTGCAGAC
AACGCCCGTC GCGGCCAGAT CCGCGCCAGC TTTGGCAAGT TTTCCAGCCG TGAGGGCGTC
GCGGCATTGC AGGCCCAGTG CGAAGACGAC CACGCTTGCA CGCCAGAAGC CGCAGGCCTG
AAGCTCCTCG ACATCCTGGG CAAGGACAAG ACCAGCGTCA ACGGCCTGAA TATCGTCACG
CTCGAAGATG AAACCGACAA GGCGCGCAAG GGCACGACCG AGGCGCTGCT GGCCCGCGCC
GGCGTGGTCA AGGCCGAGGG TTCCAATCCC TTTCGCGGCT TCACGCTGAG CGAGCTGGCT
CGCGCCAGCT TGACCCGCGC CGGCTACCGC TCGGAAGGCC AGGACAAAAA GACCTTTATC
GGCGCGGCCT TCACGCACAG CTCCAGCGAC TTTGGCAGCA TTCTGGCGAA CGTGGCCGAG
AAATCCATGC TCAAGGGCTA CGAGGAAGCC GCCGAGACGT TCCAGCTCTG GACCCGTGCC
GGCGAGCTGC CCGACTTCAA GCCCGGCAAG CGCGTGGATC TCAATGCGTT CCCGAGCCTG
CGCAAGGTCG CTGAAGGCGC CGAGTACAAA TACGCCACGA TCGGCGATCG TGGCGAGACA
GTGCTGCTGG CAACCTACGG CGAGCTGTTC TCGATCAACC GCCAGGCCAT CATCAATGAC
GACCTGGACG CCTTCACCCG CATCCCCAAG CTGATGGGGC GCGCTGCCAT TCGCACCATC
GGCGACCTGG TGTATGCCGT GCTGACGGGT AACCCGATCA TGAGCGACGG TGTGGCGCTG
TTCGATGCAG CGCATAAGAA TCTGCTGGTC GGTGGCGCGA TCTCCACCGC AACGGTCGAT
GCGATGGGCG CGGCCATGGC AAAGCAAAAG AACGGCCCTG CTGTGTTGAA CATCGCCATG
CAGTACCTGA TCGTGCCGCG TGCCTTGAGG GGCACTGCAA ATGTCGTGCG CAGCAGCGAG
TTCGAGGTGA ATGCCGGCAA GAACAGCACC ACGCCCAACA GCGTGCGCGA CACGTTCGAG
GTGATCACTG ATGCCCGCCT GGATGAAGCC TCGGCAACGG CCTGGTACGG CGCGGCCAGC
GCGACCACCA ACGACACCAT CGAGGTCAGC TACCTCGACG GCAACCAGGC GCCCGTGCTG
GAGCAAAAGG ACGGCTGGAA CGTGGACGGC ACCGAGTTCA AGGTGCGGAT CGACGCCGGC
GTGTCGCCGC TGGACTTCCG CACCCTGGCG AAAAACCCAG GCTAA
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| Protein sequence | MSKKATAWYA IRRKTAMAAA VLGVVAAAEI YIYGDIGESW YEETVSAATF VKELNDIDAT
AITVRINSIG GSVPDGLAIY NALRRHKAEV TIEIDGMALS VASLIAMAGD KVNMANNAML
MIHGPWSYVS GNSVELRDMA DQLDTWAAAM SNSYAARTGD QPAMLALLTD GKDHFYTAEQ
ALAEKFVDAI TDPMPVSASA ARDLPLNRYR SLPAALQTAS TLAAAAAPSQ EPLMTTPNSA
ATQPPAAPAA SAASAILAAD NARRGQIRAS FGKFSSREGV AALQAQCEDD HACTPEAAGL
KLLDILGKDK TSVNGLNIVT LEDETDKARK GTTEALLARA GVVKAEGSNP FRGFTLSELA
RASLTRAGYR SEGQDKKTFI GAAFTHSSSD FGSILANVAE KSMLKGYEEA AETFQLWTRA
GELPDFKPGK RVDLNAFPSL RKVAEGAEYK YATIGDRGET VLLATYGELF SINRQAIIND
DLDAFTRIPK LMGRAAIRTI GDLVYAVLTG NPIMSDGVAL FDAAHKNLLV GGAISTATVD
AMGAAMAKQK NGPAVLNIAM QYLIVPRALR GTANVVRSSE FEVNAGKNST TPNSVRDTFE
VITDARLDEA SATAWYGAAS ATTNDTIEVS YLDGNQAPVL EQKDGWNVDG TEFKVRIDAG
VSPLDFRTLA KNPG
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