| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2231 |
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| Symbol | |
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| ID | 4686870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2381548 |
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| End bp | 2382894 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639835241 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_982460 |
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| Protein GI | 121605131 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0168206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000403995 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAACCTAA AAACGACGAC GAATTTGAGC CCGATCCGGG TAGGCCTTCT GGGCATCGGG
ACCGTGGGCA GCGGCACGTT CAATGTGCTC AAGCGCAACC AGGAAGAGAT TCGCCGCCGC
GCCGGTCGCG GCATCGAGAT CACCATGGTC GCCGACCTCG ATGTGGCGCG CGCCCAGGCC
CTGGTGGGCG ATGGCGTGCT GGTGGTGGAC GATGCCCGCA AGGTCGTTGC CAGCCCTGAC
ATCGATATCG TGATCGAACT CATCGGCGGC TACGGCATTG CCAAGGCGCT GGTGCTCGAA
GCGATTGAAT CCGGCAAGCA TGTGGTGACC GCCAACAAGG CGCTGCTCGC CGTGCATGGC
ACCGAGATTT TTGCCGCCGC GCACCGCAAG GGCGTGATGG TGGCCTTTGA AGCGGCCGTG
GCCGGCGGCA TCCCGATCAT CAAAGCGCTG CGCGAAGGCC TGAGCGCCAA CTCCATCCAG
TGGATCGCCG GTATCATCAA CGGCACGACC AATTTCATCC TGTCCGAAAT GCGCGACAAG
GGCCTGGACT TCGGCGTCGT GCTCAAGGAA GCGCAAAAGC TGGGCTATGC AGAAGCCGAC
CCGACCTTCG ACATCGAAGG CGTGGACGCG GCGCACAAGG CCACGCTGAT GAGCGCGATT
GCGTTCGGCA TTCCGGTGCA GTTCGACAAG GCCTATGTCG AGGGTATCAC GAGTCTGGCC
GCGCAGGACA TCCGCTACGC CGAGCAACTC GGCTACCGCA TCAAGCTGCT GGGCATCACC
AAGCGCGTGG CGGGCGGCAT CGAGTTGCGC GTGCACCCCA GCCTGATTCC GGCCAAGCGC
CTGCTGGCCA ATGTCGAGGG CGCGATGAAC GCCGTCGTCG TGCATGGCGA CGCCGTCGGC
ACCACGCTGT ACTACGGCAA GGGCGCCGGC AGCGAGCCGA CCGCCAGCGC GGTGATTGCC
GACCTGGTTG ATATTTCCCG CCTGCACACC GCCGACCCGG AGCACCGCGT GCCGCACCTG
GCCTTCCAGC CCGACGAGAT GAGCGACCTG GCCATCGTGC CGATGAGCGA AATCGTCACC
AGCTACTACC TGCGCCTGAA CGTGGCCGAC GAGGCCGGCG TGCTCGCCAG CGTCACCGGC
ATTCTGGCCG AGGCCGGCAT CAGCATTGAC GCCGTGCTGC AGCGCGAAGC CGACGACGTG
GGCGGCGAAG GCTCGACCCA GACCGACCTG ATCATCCTGA CGCACGACTG CGTCGAAGCC
AAAATGAACG AAGCCATCGC GCAGATGCAG GCGCTGCCGA CCGTGCTGGC GCCCATCACC
CGCATCCGCA AGGAGGAACT GGCCTGA
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| Protein sequence | MNLKTTTNLS PIRVGLLGIG TVGSGTFNVL KRNQEEIRRR AGRGIEITMV ADLDVARAQA
LVGDGVLVVD DARKVVASPD IDIVIELIGG YGIAKALVLE AIESGKHVVT ANKALLAVHG
TEIFAAAHRK GVMVAFEAAV AGGIPIIKAL REGLSANSIQ WIAGIINGTT NFILSEMRDK
GLDFGVVLKE AQKLGYAEAD PTFDIEGVDA AHKATLMSAI AFGIPVQFDK AYVEGITSLA
AQDIRYAEQL GYRIKLLGIT KRVAGGIELR VHPSLIPAKR LLANVEGAMN AVVVHGDAVG
TTLYYGKGAG SEPTASAVIA DLVDISRLHT ADPEHRVPHL AFQPDEMSDL AIVPMSEIVT
SYYLRLNVAD EAGVLASVTG ILAEAGISID AVLQREADDV GGEGSTQTDL IILTHDCVEA
KMNEAIAQMQ ALPTVLAPIT RIRKEELA
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