| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2228 |
|---|
| Symbol | |
|---|
| ID | 4687166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 2378207 |
|---|
| End bp | 2379466 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639835238 |
|---|
| Product | molybdenum cofactor synthesis domain-containing protein |
|---|
| Protein accession | YP_982457 |
|---|
| Protein GI | 121605128 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0303] Molybdopterin biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.303028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00115027 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAG TTTTAACTTC TTCTTCAGTG GCAGCACGGC CTGAACGCGC GCCCCTGAAG
CCGCTTGACC TGGCGCTGGC CGAGTTGCTG GCCTTTGCCG CGCCGCTGAC ACCCGCCGAG
AACGTCTCGA CCTTTGATGC CGATGGCCGG GTGCTCGCGC AAGACCTGCT GTCCGGGCTG
GACGTGCCGG CGCACGACAA CAGCTCGATG GATGGCTATG CCGTGCGCTG CGCCGACTGG
GCGGGCGCCG ATACGCTGCT GCAGGTCAGG CAGCGCATTC CGGCCGGCAG CAGCGGCCAT
TTGCTGGCGC CGGCTTCGGC GGCGCGGATT TTCACCGGCG CACCGATTCC GCCTGGCGCC
GATGCGGTGG TGATGCAGGA AGACTGCGAC GCGGTCGATG GCGGCGTTCG CATCCGGGTG
CAACCCCGGC CCGGCCAGTG GATTCGCCGG CGCGGCGAAG ATGTTGCGGC CGGCGAAGTG
GTGCTGCACT GCGGCGAACG CTTGAGCCCG GCGTCGCTGG GGCTGGCCGC CAGCATCGGC
TTTGGCAGGC TGCAAGTCGC GCCGCGCGTT CGGGTGGCGC TGTTCTCCAC CGGCGATGAG
CTGGTCATGC CGGGCGATGT GGCGCCTGCC GACATGAAAC CCGGTGCGAC TTACAACTCC
AACCGGTTCT TCCTGCGCGC CTTGCTGCAG CGCCTGGGCT GCATCGTGAC CGACCTGGGC
ATCGTTCCCG ACCGGCTCGA TGCAACCATT GAAGCGCTCA GGGGCGCCAG CCGGCAGCAT
GACCTGGTCC TGACCAGCGG CGGCGTGTCG GTCGGCGAGG AAGACCACAT CAAGCCGGCC
GTGCAGGCGC TGGGCCAGCT CAATTTGTGG CACCTCGCCA TGAAGCCGGG CAAGCCGTTT
GCCTACGGAA AGATAGCCGC AGCCCATTTT CTGGGCCTGC CGGGCAACCC GGTGTCCAGC
TTCGTGACTT TTTTGCTGCT GGTGCGGCCC TTCATTCTCA AGCTCCAGGG GGCGACCGCG
CTTGCTCCTG AATCAATAGC GCTCCCCGCC CATTTTGATT GCGCAAAAGC CGATAAACGC
CGTGAATTCC TGCGTGTCAG GCTGAACGCG GCGGGCGGGC TAGAACTGTT CAGCAACCAG
AGTTCGGGTG TGCTGACCTC TGCGGTCTGG GGCGACGGGC TGGTGGACAA CCCGGCGGGC
CAGACCATTG CCCATGGCGA TACTGTGCGT TTTATGCCGT TTTCGGCGCT GCTGTCGTGA
|
|---|
| Protein sequence | MSSVLTSSSV AARPERAPLK PLDLALAELL AFAAPLTPAE NVSTFDADGR VLAQDLLSGL
DVPAHDNSSM DGYAVRCADW AGADTLLQVR QRIPAGSSGH LLAPASAARI FTGAPIPPGA
DAVVMQEDCD AVDGGVRIRV QPRPGQWIRR RGEDVAAGEV VLHCGERLSP ASLGLAASIG
FGRLQVAPRV RVALFSTGDE LVMPGDVAPA DMKPGATYNS NRFFLRALLQ RLGCIVTDLG
IVPDRLDATI EALRGASRQH DLVLTSGGVS VGEEDHIKPA VQALGQLNLW HLAMKPGKPF
AYGKIAAAHF LGLPGNPVSS FVTFLLLVRP FILKLQGATA LAPESIALPA HFDCAKADKR
REFLRVRLNA AGGLELFSNQ SSGVLTSAVW GDGLVDNPAG QTIAHGDTVR FMPFSALLS
|
|---|
| |