| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2224 |
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| Symbol | |
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| ID | 4686182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2373537 |
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| End bp | 2374613 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639835234 |
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| Product | Allergen V5/Tpx-1 family protein |
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| Protein accession | YP_982453 |
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| Protein GI | 121605124 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.449099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00516568 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTTTGA TGAATACGCA TTTTTCAGAT GCAGTCCCTC GAAAACCAGC CCTCGGGCTC
CTGCCGGCCT TGGCACTTGC GGCGCTGCTG TCGGCCTGCG GCGGCGGCAG CGACAGCGCT
TCGCCTCCAG CCCAGGCAGC GGCCCCGGCC ACGGCATCGC CCAACCCCTC CCTCGTCACC
TCGCTTGGCA CCGCGCCGGC CTACCCTGCC GACAGCGAAG AACTGGCCGC CTTCACGCTG
CTCAACGCGG AGCGCAACCG CTGCGGTTTC GGCCTGCTGG CCCAGAATGC GCCACTCGAC
GCAGCCGCCA GGGCGCATGC CGATTACATG ATCATCAACA GCCTGAACTC GCATCTGGAA
AACGCAACGC AGTACCCCGA GGGCTTTACC GGCACCGAGC CACTGGCCCG CGTCAGGGCA
CAGGGCTATA CCGACGTAGG CGGCCTGACG GATGAGTTTG CATTTTTCAC CACCAGCAAC
CCGGTCCAGA CCAAGCGGGG CTTCGGGGTG CTCGGCATTC GCGGCTTGCT CAATGCGCCC
TACCACCTGA GCGGCCTGAT GACCGGCTAC CGCGATGTGG GCATCGCCGT GCGTTCCAAC
GCCGACACGG GCAAGGGACA GCGCGGCATT TTCGTGCAGG TCAATGCCGC CTACACGGCA
AGCGCGGGTC CGCAGCAGCT GGGCAGCGCC GATGTCCAGA CCTATCCGTG CGAAGGCACG
ACCGGCGTCA ATCGCCAGTT GACCGATGAA ACGCCCAACC CGGTGCCGGG CCGCGACCTG
CGCGCGAATC CGCTGGGCTC GACCATCTAT ATCGCTGTTC GCGAGGGAAA CCGGCTGGCC
ATTGCCAACG CTGCCATGAC AAATGCCTCG ACCGGGCAAG CCGTTGCATT GCGCCCTGCG
GTGACTTCGG CCAACGACCC GCACGGGCCG TGTCTGGGCG GCTGCTTTGC GCCGCACCAG
GCGTATATCG TTGCCGATGC GCCCCTGCAG CCCGATACCG CCTACACCGT GATGATCAGC
GGCACCAACA ATGGCGGCGC CTTCAGCCGC AGCTTTACCT TTGCCACGGG AAGCTGA
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| Protein sequence | MALMNTHFSD AVPRKPALGL LPALALAALL SACGGGSDSA SPPAQAAAPA TASPNPSLVT
SLGTAPAYPA DSEELAAFTL LNAERNRCGF GLLAQNAPLD AAARAHADYM IINSLNSHLE
NATQYPEGFT GTEPLARVRA QGYTDVGGLT DEFAFFTTSN PVQTKRGFGV LGIRGLLNAP
YHLSGLMTGY RDVGIAVRSN ADTGKGQRGI FVQVNAAYTA SAGPQQLGSA DVQTYPCEGT
TGVNRQLTDE TPNPVPGRDL RANPLGSTIY IAVREGNRLA IANAAMTNAS TGQAVALRPA
VTSANDPHGP CLGGCFAPHQ AYIVADAPLQ PDTAYTVMIS GTNNGGAFSR SFTFATGS
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