| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2216 |
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| Symbol | |
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| ID | 4686800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2366977 |
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| End bp | 2368212 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639835226 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_982445 |
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| Protein GI | 121605116 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.167097 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACTT CAAGCACCTT GAGCCAGCCC GCTGGCGCCG TTTCCCTGCG CAACGATGCC
GGCGTGATCG GCCTGGTCGG GCTGGCGCAC TTGATCAGCC ACTTCAGCCA GTTGCTGCTG
GCGCCGCTGT TTCCGTGGCT CAAGGAGGCC TTCGGCGTCA GCTATGCCGA GCTGGGGTTT
TTGATGACGA TTTTCTTCGT CGTGTCGTGC GCGGTGCAGG CGCTGTCGGG CTTCGTGGTG
GACCGTTTCG GCCCGCGTCC GATCCTGTTT GGTGGCCTGG CCTTGCTGGG CGTGGCGGCT
TTTGGCTATT CCATCAGCAC CAGCTACTGG ATGCTGGCCG GCTTCGCGGT GGTCGGCGGC
ATGGGCAACG GCGTGTTTCA CCCGGTGGAC TACACGCTGC TCAATCGCAA GGTCAGCGCG
TCGCGGCTGG GTCACGCCTA CAGCGTGCAC GGCATCACCG GCAGCCTGGG CTGGGCGCTG
GCGCCGGCGC TGGTGGTCGG CCTGACGTTT GCCTTTTCCT GGCGCGTGGC GCTGGCGGCC
GCAGGCGCGC TGACGTTCGC GGTGCTGGCG GTCTTGCTGC TGAACCGGGG CACGCTGGCG
CTGAAGGTGG CTCCGCCGGC CAGCGGCGCG GCCAAGGTTC AGGGCGGGCT GGACTTCCTG
AAGATTCCGG CCGTGTGGAT GTGCTTTACC TTTTTCTTCT GGTTTGCGAT TGTGCTCAGC
GTGGTGCAGG CCTTTGCGCC CGAGGCCGCG CGGCAGCTGC ATGGCGTGCC GCAGTCGCTG
GTGGCGATGT GCCTGACGAT CTACATGGTC TGCAGCGCCG GCGGCATGGT GCTGGGCGGC
TTCCTGGCAT CTGACCCGTC GCGCTGCGAG CGCATCGTCG GCGCGGGCAT GGGGCTGGCG
GCGCTGGTGG CCTTGATTCT GGCGCTGGGC AGCCTGTCGC CCTGGATGGT GCCGGTGCTG
TTTGGCGTGA TGGGGTTTGC CGCCGGCATT GCCGGGCCGT CGCGCGACCT GCTGGTCAAG
CGCTCGACGC CTGAAAACGC CTCGGGCCGG GTGTATGGCG TGGTCTATGC CGGGCTGGAC
ATCGGCCAGG CGGTGTCGCC GCTGATTTTC GGCGCGCTGA TGGACCATGG CCAATACCGT
GGCGTGCTGC TGGGCCTGGC CTTGATGCAG GGCGTGCTGA TTGCCAGCGC CTTCAACGTG
CGGCGCGTGC GCCGCACCGC CCTGGCAACG GCCTGA
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| Protein sequence | MTTSSTLSQP AGAVSLRNDA GVIGLVGLAH LISHFSQLLL APLFPWLKEA FGVSYAELGF
LMTIFFVVSC AVQALSGFVV DRFGPRPILF GGLALLGVAA FGYSISTSYW MLAGFAVVGG
MGNGVFHPVD YTLLNRKVSA SRLGHAYSVH GITGSLGWAL APALVVGLTF AFSWRVALAA
AGALTFAVLA VLLLNRGTLA LKVAPPASGA AKVQGGLDFL KIPAVWMCFT FFFWFAIVLS
VVQAFAPEAA RQLHGVPQSL VAMCLTIYMV CSAGGMVLGG FLASDPSRCE RIVGAGMGLA
ALVALILALG SLSPWMVPVL FGVMGFAAGI AGPSRDLLVK RSTPENASGR VYGVVYAGLD
IGQAVSPLIF GALMDHGQYR GVLLGLALMQ GVLIASAFNV RRVRRTALAT A
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