| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2213 |
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| Symbol | |
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| ID | 4686270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2362240 |
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| End bp | 2363982 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639835223 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_982442 |
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| Protein GI | 121605113 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.851331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.770524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCCA TCGTTCGGGA CGGCAGAGGG CAGGGCACAA TAAAGCGCAT GACCCAACAA
CTTGCCGGCC ATCTTCTTGT TGACTGCCTC CTGGCCCAGG GCGTCACCCA TGCATTCGGC
GTTCCGGGCG AAAGCTACCT GGCGGTGCTT GACGGGCTGC ATGCGCGCCG GGACCAGATC
CGCTTCATCA CCTGCCGCCA GGAGGGTGGC GCGGCCTTCA TGGCCGAAGC CCACGGCAAG
CTGACCGGAC GCCCCGGCGT GTGCATGGTC ACGCGCGGGC CGGGCGCGAC CAATGCCTCC
ATCGGCGTGC ACACGGCTTT CCAGGATTCG ACGCCGATGG TGCTGCTGGT CGGCGACGTG
GCCAGCGACT GCCGTGACCG CGAGGCTTTC CAGGAAGTGG ACTATTCGAG CTTTTTCGGC
CCCAGTACCA AGGGCTTTGC CAAGCGCGTC GAGCGCATCG ATGACGCCGA CCGCATTCCC
GAATACGTGG CGCGCGCCTT TGCCACGGCG ATGAACGGCC GGCCCGGCCC GGTGGTGCTG
GTGCTGCCCG AGGACATGCT GACGCGCATG ACCGCTGCCC GGCCCTTGCC ACGGGTGGAA
GCGGTGCAGG CCTGGAGCGA CCCCGGCGCC CTGCGCACGC TGCGCGAGAT GCTGCTGGCG
TCAAAGCAGC CGCTGATCAT CGCGGGCGGC GGTGGCTGGA CGCCGCAGTC GGCGCAGGCC
TTGCAGCGCT TTGCCGAAAA CTGGAAGCTG CCGGTCGGCA ACGCCTTTCG CTTCCAGGAC
ACGTTTGACA ACCACCACCC GCTGTATGCC GGCGATGTGG GCATCGGCCT GAGTCCGAAA
CTGGCTGCGC GCGTCAAGGC CAGCGACCTG ATCATTGCCA TCGGCCCGCG CCTGGGCGAA
ATGACGACCG GCAACTACAC GCTGATCGAA GCGCCCCGGC CGAAGCAGAA ACTGGTGCAT
ATCCACGCCA GCGCCGAGGA ACTCAACCGC GTGTTCCAGG CCGACCTGGC GATCAACGCG
ACCATGAATG CCGCCGCGCG TTCGCTCGAA GTCTTGAGCG CGCCGGTATC GGTGCCGTGG
GAAGCCTGGA CGGCGTCGGC CAACGAAGAC TACCTGGCCA ACCTGGTGCC GCAAGCCTTG
CCGGGCGACG TCGACATGCC GGCCATCGTC GGCCTGCTGC AGCGCTATCT GCCGGCGGAT
GCCGTGCTGA CCAACGGCGC AGGCAATTTC GCCAGCTGGA TTCACCGTTT TTTCAAGCAC
CACGGGCTGG CCAAGGGACA CAAGACGCAG CTCGCGCCCA CCGTCGGCGC GATGGGCTAC
GGCGTGCCGG CCGGCATTGC GGCGGCCATC ACGACCGGGC GTGTCGCTTT CACGATTGCC
GGCGACGGCG ACTTCCTGAT GAACGGGCAA GAGCTGGCCA CCGCCGTTCA GCACGGCGCC
AAAAGCATCA TCGTGCTGCT CAACAACGGC ATGTACGGCA CCATCCGCAT GCACCAGGAA
AAGCAGTATC CGCAGCATGA AAGCGGCTCG CGCCTGAACA ACCCGGACTT TGCGGCGCTG
GCGCGCGCCT ACGGTTATGC CGGCGTGCGC ATCACCCGCA CGGACGAATT CGAGGCCGAA
CTGCTGGCCG CGCTGGATCG GTCCGAAGGC ACGCTGATCG AGGTGACACT GGACCCGGAA
GTCATCACCA CACGCGCCAC GCTGTCATCC ATCACGCAGG GCGCGCTGAA ACAGAAGCTA
TAA
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| Protein sequence | MAAIVRDGRG QGTIKRMTQQ LAGHLLVDCL LAQGVTHAFG VPGESYLAVL DGLHARRDQI
RFITCRQEGG AAFMAEAHGK LTGRPGVCMV TRGPGATNAS IGVHTAFQDS TPMVLLVGDV
ASDCRDREAF QEVDYSSFFG PSTKGFAKRV ERIDDADRIP EYVARAFATA MNGRPGPVVL
VLPEDMLTRM TAARPLPRVE AVQAWSDPGA LRTLREMLLA SKQPLIIAGG GGWTPQSAQA
LQRFAENWKL PVGNAFRFQD TFDNHHPLYA GDVGIGLSPK LAARVKASDL IIAIGPRLGE
MTTGNYTLIE APRPKQKLVH IHASAEELNR VFQADLAINA TMNAAARSLE VLSAPVSVPW
EAWTASANED YLANLVPQAL PGDVDMPAIV GLLQRYLPAD AVLTNGAGNF ASWIHRFFKH
HGLAKGHKTQ LAPTVGAMGY GVPAGIAAAI TTGRVAFTIA GDGDFLMNGQ ELATAVQHGA
KSIIVLLNNG MYGTIRMHQE KQYPQHESGS RLNNPDFAAL ARAYGYAGVR ITRTDEFEAE
LLAALDRSEG TLIEVTLDPE VITTRATLSS ITQGALKQKL
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