Gene Pnap_2202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2202 
Symbol 
ID4686360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2350678 
End bp2351382 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content61% 
IMG OID639835212 
Productphosphate uptake regulator, PhoU 
Protein accessionYP_982431 
Protein GI121605102 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0704] Phosphate uptake regulator 
TIGRFAM ID[TIGR02135] phosphate transport system regulatory protein PhoU 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.246879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA AACACCTGTC CACCCAGTTT GACAGTGAAC TCAACGGGGT ATCGTCCCGC 
GTGATGGAAC TCGGCGGCCT GGTCGAATCC CAGTTGCGGC TGGCGATTTA TGCGCTGTCG
CAGTTCAGCG CCGAAAGCGC CAACCAGGTC ATCGAAACCG AGCTTCGCGT CAACGGCATG
GAACTGGAGA TTGACCGCGA ACTGTCGTCC ATCATCGCGC GGCGCCAGCC CACGGCGCGC
GACCTGCGGC TGCTGATCGC GATTTCAAAA ACCACCGCCA ATCTGGAACG GGCGGGCGAT
GAGGCGGCAA AAATCGCCCG CATGGTCAAG TCCATCATCG ACAGCGGTGC ATCGCGCACG
CTGCCATCGA CCGATCTGCG GGTGGCTGCC GACCTGGCCT CGGGCCTGTT GCGCAAGGCG
CTTGACGCCT TTGCCCGGCT GGACACGGCG GCAGCGGTGT CCATCCTCAA GGAAGACGAC
CAGATCGATG CCGAATTTGA TGGCTTCGTG CGCAAGCTGA TCACCTACAT GATGGAAGAC
CCGCGCACCA TCTCGGCCAG CCTGGACCTG CTGTTTATCG CCAAGGCCAT CGAGCGCGTG
GGCGACCATG CCAAGAACAT TGCCGAGTTC ATCATCTACA TCGTCAAGGG CGCCGATGTC
CGGCACAGCC CGATGGACCA GATCGAGTCC GCCGTCAAGC AATGA
 
Protein sequence
MADKHLSTQF DSELNGVSSR VMELGGLVES QLRLAIYALS QFSAESANQV IETELRVNGM 
ELEIDRELSS IIARRQPTAR DLRLLIAISK TTANLERAGD EAAKIARMVK SIIDSGASRT
LPSTDLRVAA DLASGLLRKA LDAFARLDTA AAVSILKEDD QIDAEFDGFV RKLITYMMED
PRTISASLDL LFIAKAIERV GDHAKNIAEF IIYIVKGADV RHSPMDQIES AVKQ