Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2202 |
Symbol | |
ID | 4686360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2350678 |
End bp | 2351382 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639835212 |
Product | phosphate uptake regulator, PhoU |
Protein accession | YP_982431 |
Protein GI | 121605102 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0704] Phosphate uptake regulator |
TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.246879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACA AACACCTGTC CACCCAGTTT GACAGTGAAC TCAACGGGGT ATCGTCCCGC GTGATGGAAC TCGGCGGCCT GGTCGAATCC CAGTTGCGGC TGGCGATTTA TGCGCTGTCG CAGTTCAGCG CCGAAAGCGC CAACCAGGTC ATCGAAACCG AGCTTCGCGT CAACGGCATG GAACTGGAGA TTGACCGCGA ACTGTCGTCC ATCATCGCGC GGCGCCAGCC CACGGCGCGC GACCTGCGGC TGCTGATCGC GATTTCAAAA ACCACCGCCA ATCTGGAACG GGCGGGCGAT GAGGCGGCAA AAATCGCCCG CATGGTCAAG TCCATCATCG ACAGCGGTGC ATCGCGCACG CTGCCATCGA CCGATCTGCG GGTGGCTGCC GACCTGGCCT CGGGCCTGTT GCGCAAGGCG CTTGACGCCT TTGCCCGGCT GGACACGGCG GCAGCGGTGT CCATCCTCAA GGAAGACGAC CAGATCGATG CCGAATTTGA TGGCTTCGTG CGCAAGCTGA TCACCTACAT GATGGAAGAC CCGCGCACCA TCTCGGCCAG CCTGGACCTG CTGTTTATCG CCAAGGCCAT CGAGCGCGTG GGCGACCATG CCAAGAACAT TGCCGAGTTC ATCATCTACA TCGTCAAGGG CGCCGATGTC CGGCACAGCC CGATGGACCA GATCGAGTCC GCCGTCAAGC AATGA
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Protein sequence | MADKHLSTQF DSELNGVSSR VMELGGLVES QLRLAIYALS QFSAESANQV IETELRVNGM ELEIDRELSS IIARRQPTAR DLRLLIAISK TTANLERAGD EAAKIARMVK SIIDSGASRT LPSTDLRVAA DLASGLLRKA LDAFARLDTA AAVSILKEDD QIDAEFDGFV RKLITYMMED PRTISASLDL LFIAKAIERV GDHAKNIAEF IIYIVKGADV RHSPMDQIES AVKQ
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