Gene Pnap_2195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2195 
Symbol 
ID4686559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2343052 
End bp2343384 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content58% 
IMG OID639835205 
Productthioredoxin 
Protein accessionYP_982424 
Protein GI121605095 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.173373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATG AACTGATCAA ACATACCACC GATGCCACCT TTGACGCCGA CGTGCTGAAA 
TCATCCACCC CCGTGCTGGT CGATTACTGG GCCGAGTGGT GCGGCCCGTG CAAGATGATT
GCGCCGATTC TTGACGAAGT GGCCACGGGC TATGAAGGCA AGCTGCAAAT CGCCAAGATG
AATGTCGATG AAAACCGCGA GATTCCCGCC AAGTTCGGCA TTCGCGGCAT TCCCACGCTG
ATGCTGTTCA AGGACGGCCA GCTGGCAGCC ACCAAAGTGG GCGCGCTGAG CAAGTCGCAG
CTGACCGCAT TCATCGACCA GCAACTGGCC TGA
 
Protein sequence
MANELIKHTT DATFDADVLK SSTPVLVDYW AEWCGPCKMI APILDEVATG YEGKLQIAKM 
NVDENREIPA KFGIRGIPTL MLFKDGQLAA TKVGALSKSQ LTAFIDQQLA