Gene Pnap_2185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2185 
Symbol 
ID4686839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2329588 
End bp2330295 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content67% 
IMG OID639835195 
Productdienelactone hydrolase 
Protein accessionYP_982414 
Protein GI121605085 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCC TTGGGCAAGC CCCCGTTTCG CGTGAAGTCC GCATTCCCAG CGGCGACGCC 
CGGCTTTACG GCGACCTGAC ACGGCCGGCC GACGCTGTTG GCCTGGTGCT GTTTGTTCAC
GGCAGCGGCA GCGGCCGGCA CAGCGCGCGC AACCGGCTGG TGGCGCGCAA GCTGCAGCAA
GCCGGCATGG CCACGCTGCT GTTCGACCTG CTGACGGCGC AGGAAGAGCA GATCGACCTT
CACACCCGCG AACACCGCTT CGACATCGCC CTGCTCACCG GCCGCCTTCA GGACGCGACC
ACCTGGGCCA TGGCGCAGCC CGAACTGCAG CACTTGCCCA TCGGCTATTT CGGCGCCAGC
ACCGGCAGCG CGGCGGCCAT CATTGCCGCA GCCCGGCTGG GCAAGCAAAT TGCCGCCGTG
GTCTCGCGCG GCGGCCGGCC CGACCTGGCC GGCCCGGTGG CGCTGGCCGC CGTCACCGCG
CCCACGCTGC TGATCGTCGG CGGCGCGGAC CATGGCGTCG TGGAATTGAA CGAGCAGTCG
TTCGCGCATC TGAGTTGCGA CAAGCGGCTG GTCATCGTCC AGGGCGCGAC CCATCTGTTT
GAAGAAAAAG GCGCGCTGGA GGAAGTGGCC GAACTGGCTG CATCCTGGCT CAAGGCCCAT
CTGGCAGGCC AAAAACCGTC ATCGCCAACA CAGGACAAAA CCGATTAG
 
Protein sequence
MNTLGQAPVS REVRIPSGDA RLYGDLTRPA DAVGLVLFVH GSGSGRHSAR NRLVARKLQQ 
AGMATLLFDL LTAQEEQIDL HTREHRFDIA LLTGRLQDAT TWAMAQPELQ HLPIGYFGAS
TGSAAAIIAA ARLGKQIAAV VSRGGRPDLA GPVALAAVTA PTLLIVGGAD HGVVELNEQS
FAHLSCDKRL VIVQGATHLF EEKGALEEVA ELAASWLKAH LAGQKPSSPT QDKTD