Gene Pnap_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2172 
Symbol 
ID4687619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2310091 
End bp2310468 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content59% 
IMG OID639835182 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_982401 
Protein GI121605072 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.130516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCA CAACTCCAGC GCAACGCGGT ATTGTTTTGT TTGCCCATGG TTCGCGTGAC 
CCGCTGTGGC GCCTGCCGAT TGAAGCAGTC GCCGCGCAAA TCAGCGCCCG CCACCCCGGC
ACCCTGGTGC GCTGCGCCTA TCTGGAAATC TGCTCGCCGT CCCTACCGGA AGCCGCTACT
GATTTAATAG CTGTCGGCGC AATCCAGTTA AGGGTATTTC CACTTTTTCT GGGTGTCGGC
AAACATGCGC GTGAAGACCT GCCGCTGCTG ATCGAAGAAA TCCGGCTTTC GCACCCCGGC
GTAAGCATTG AACTCCTGCC GACGGCAGGC GAGTATGAAC AAATGACGGC CCTGATGGCG
GATATTGCCG TGGCCTGA
 
Protein sequence
MTPTTPAQRG IVLFAHGSRD PLWRLPIEAV AAQISARHPG TLVRCAYLEI CSPSLPEAAT 
DLIAVGAIQL RVFPLFLGVG KHAREDLPLL IEEIRLSHPG VSIELLPTAG EYEQMTALMA
DIAVA