| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2148 |
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| Symbol | |
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| ID | 4688349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2289055 |
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| End bp | 2290038 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639835158 |
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| Product | cobalamin biosynthesis protein CobD |
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| Protein accession | YP_982377 |
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| Protein GI | 121605048 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.445636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0604171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTGG TTCTGGCATT CACCATGCCC GTGGTGTTGC TGCTGGCCCT GTGGATTGAC
CGCCGCTGGG GCGAGCCGCC CGTGGCGTTT CATCCCGTGG TCTGGATCGG GCATTACCTC
AAGGCCTGCG GCCGTGTCAC CGTGCGCTGC CCGCCAGCAC CGGCCTTTGT GCTGGGCGCG
CTGGCCTGGA TGGCGGGCGC GGCGGCGGCC GGCGCGCTGG CCTGGGCGCT GCAGGCCTTG
AGCTTCTGGC AGCTTGCCCG TTTCATGGCC CGGCCCGGCA TTGAAAACGG GCTGGCCGCC
ACCGTGCTGA TTGCGCTGAT GGCCTGGCTG CTCAAGTCCA TGCTGTCCTG GCGCATGCTG
GTTGACGAAG TCGGCGCGGT CGAGGCGGCG CTGCGCCAGT CGCTGCCCGC CGGGCGCGAG
CGGCTGTCCT GGCTGGTCAG CCGCGACACG GCCAGCCTGA GCGAAAGCCA GGTGCGCGAA
AGCGTCATTG AAACCCTGGC TGAAAACCTC AACGACTCGG TGGTCGCGCC GATCTTCTGG
TTCGTGCTGC TGGGCCTGCC GGGCGCGGCG GTGTACCGCT TCGCCAACAC CGCCGATGCG
ATGTGGGGCT ACCGGGGAAC CTACCGGGGC CAGCACTGGG AATGGGCCGG CAAATGGGCG
GCGCGCGCCG ACGATGCGCT GTCGTGGCTG CCCGCGCGGC TGACGGCCTG GCTGCTGATG
GGCGTGACGC GGCAAGTCCA GTTCGGCGCA TTGCGGCGCG AAGCGGCCCG CACGCCCTCG
CCCAACAGCG GGTGGCCGAT GGCGGCGATG GCCATGGCGC TCGGTGTCAC CTTAAGCAAG
CCCGGTGTCT ACACGCTGAA CGCCACCGGG CGCGCGCCAC GGGCCGGCGA TGTGCCGCTG
GCGCAAAAAA ATGCATCAAA AGTGGTGTTT GCGCTTGTCC CGTATGCGGT GATAGCTATT
GTTTCAGTAG CATGGATGAT TTGA
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| Protein sequence | MPLVLAFTMP VVLLLALWID RRWGEPPVAF HPVVWIGHYL KACGRVTVRC PPAPAFVLGA
LAWMAGAAAA GALAWALQAL SFWQLARFMA RPGIENGLAA TVLIALMAWL LKSMLSWRML
VDEVGAVEAA LRQSLPAGRE RLSWLVSRDT ASLSESQVRE SVIETLAENL NDSVVAPIFW
FVLLGLPGAA VYRFANTADA MWGYRGTYRG QHWEWAGKWA ARADDALSWL PARLTAWLLM
GVTRQVQFGA LRREAARTPS PNSGWPMAAM AMALGVTLSK PGVYTLNATG RAPRAGDVPL
AQKNASKVVF ALVPYAVIAI VSVAWMI
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