| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2141 |
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| Symbol | |
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| ID | 4687957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2281725 |
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| End bp | 2282906 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639835151 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_982370 |
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| Protein GI | 121605041 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00510595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACACGAC CGCTTGACGG CATCACCGTT GTTTCGCTCG AACATGCGAT TGCCGCGCCG
TTCTGCACCC GCCAGCTGGC CGACCTGGGC GCGCGCGTCA TCAAGGTCGA GCGCCCCGGC
GTAGGCGACT TTGCCCGCGC CTATGACAGC CGCGTCAAGG GCCAGGCCTC GCATTTCGTC
TGGACCAACC GCTCCAAGGA AAGCCTGACG CTGGACCTCA AGCAGCCGGA CGCGCTGGCG
GCGCTCAAAG ACCTGCTGGG CCAGGCCGAC GTGCTGGTGC AAAACCTCGC GCCCGGCGCG
GCGGCGCGCA TGGGGCTGTC GTTCGAGGCG CTCAGCCAGC TGCATCCAAA GCTGATCGTC
TGCGATATTT CGGGCTATGG CGAGGACGGC CCCTACCGCG ACAAGAAGGC CTACGACCTC
CTGATCCAGA GCGAAGCGGG CATGCTGTCG ATCACCGGCA CGCCCGACGA ACCCAGCAAG
GCCGGCAATT CGATGGCCGA CATTGCCGCC GGCATGTATG CCTACACCGG CATCCTGTCG
GCGCTGCTGC TGCGCGCCAA GACCGGGCAG GGCAGCCACA TCGACGTGTC GATGCTCGAA
TCGCTGGCCG AATGGATGGG CTACCCGCTG TATTACGCGT TTGAAGGCGC GCCGCCGCCG
CCGCGCACGG CCGCATCGCA CGCCAGCATC TACCCCTATG GTCCGTTCCA GGCGGGCGAC
GGCGGCACGG TCATGCTGGG CCTGCAGAAC GAGCGCGAGT GGAAGCTGTT CTGCGAGGTG
GTGCTCCAGG ATGCGGGCCT GGCCGGCGAT GCGCGCTTTG ACAGCAATGC CAAACGCAAT
GAACACCGCG AGGCGCTCAA GGCCATCATC CTGGCGACCT TTGCCAGCCT GAACACGGCC
GAGGTCGTGG CGCGGCTCGA CAAGGCGCAG ATCGCCAACG CCCGCATGAA CAGCATGGCG
GAAGTCTGGG CGCACCCGCA ACTCAAGGCG CGCGAGCGCT GGCAGTCCGT GGGCTCGCCG
GCCGGCGCTA TTCCCGCGCT GCTGCCGCCG GGCCGCAACA ACAGTTTTGA CTATCGCATG
GACGCCATTC CGGCCGTCGG CCAGCACACC GACGCCATCC TGCGCGAGCT GGGCCAGGGC
GATGAGGCCA TTGCCCGGTT GCGCGCGGCG GGCGCCATCT GA
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| Protein sequence | MTRPLDGITV VSLEHAIAAP FCTRQLADLG ARVIKVERPG VGDFARAYDS RVKGQASHFV
WTNRSKESLT LDLKQPDALA ALKDLLGQAD VLVQNLAPGA AARMGLSFEA LSQLHPKLIV
CDISGYGEDG PYRDKKAYDL LIQSEAGMLS ITGTPDEPSK AGNSMADIAA GMYAYTGILS
ALLLRAKTGQ GSHIDVSMLE SLAEWMGYPL YYAFEGAPPP PRTAASHASI YPYGPFQAGD
GGTVMLGLQN EREWKLFCEV VLQDAGLAGD ARFDSNAKRN EHREALKAII LATFASLNTA
EVVARLDKAQ IANARMNSMA EVWAHPQLKA RERWQSVGSP AGAIPALLPP GRNNSFDYRM
DAIPAVGQHT DAILRELGQG DEAIARLRAA GAI
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