| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2139 |
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| Symbol | |
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| ID | 4688040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2279372 |
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| End bp | 2280244 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639835149 |
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| Product | HpcH/HpaI aldolase |
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| Protein accession | YP_982368 |
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| Protein GI | 121605039 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2301] Citrate lyase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.747659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00493167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCTGAAA TACCTGTGAC CCTGGCGCTG GCTTCGGCGC GCTCCTTTTT GTTTGTTCCC
GCCACCCGGC CCGAGCGCTT TGCCAAGGCG CTGGCATCCG GTGCCGACGC CGTCATCATC
GACCTGGAAG ATGCGGTGGC CCCGGCCGAC AAGAGCGCCG CACGGCAGGC CCTGCTGCAG
GCGTTTGACG GCATTGATGC GGCCCAGCGC CATCGCTTGC TGGTGCGCAT CAACGCCGCC
GGCACGCCCT GGCATGCCGA CGACCTGATC GCCCTGCGCG AGCTGGCCGC GCACGGACTT
GGCGCGGTGA TGGTGTCCAA GGCCGAATCG GCGGCCGTGC TGGATGAGGT GGCGGCGCAC
GCCGGCCCCT CCTGCGCGCT GCTGCCGCTG ATCGAGTCGG TCGCCGGCCT CGATGCCGTT
GATGCGCTGG CGGCCTGCCC GCGGGTAGCG CGCCTGGCCT TCGGCCATCT CGATTTCCAG
GCCGATGCGG GCCTGGCCTG CGATGCGGCC GAGCTTGAAC TGATACCCGT GCGCCTGGCG
CTGGTGCTGG CGTCGCGCCG CGCCGCTCTA GCCGCGCCGG TCGATGGCAT TTCGCCCGGT
ACGCGGGACA CGGCGCAGCT GAGCCTTGAC GCGGCGCGCA GCCGGCGCGG CGGCTTTGGC
GGCAAGCTGT GCATCCACCC GGCGCAGGCG GCGGCGGTCA ATGCGGCGTT CTCGCCCGGC
GCGGCCGAGA TCGACTGGGC GCGGCGCGTG CAGGCAGCCT TCGAGGCGGC CGGCGGCGGC
GTGTTCAGCC TCGATGGCCG CATGGTGGAT GCGCCGGTAT TGCTCCTGGC GCAGCGCACG
CTGGCGCAGG CGGCGCTGCA TGCGCTGACG TAG
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| Protein sequence | MSEIPVTLAL ASARSFLFVP ATRPERFAKA LASGADAVII DLEDAVAPAD KSAARQALLQ
AFDGIDAAQR HRLLVRINAA GTPWHADDLI ALRELAAHGL GAVMVSKAES AAVLDEVAAH
AGPSCALLPL IESVAGLDAV DALAACPRVA RLAFGHLDFQ ADAGLACDAA ELELIPVRLA
LVLASRRAAL AAPVDGISPG TRDTAQLSLD AARSRRGGFG GKLCIHPAQA AAVNAAFSPG
AAEIDWARRV QAAFEAAGGG VFSLDGRMVD APVLLLAQRT LAQAALHALT
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