Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2138 |
Symbol | |
ID | 4688218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2278333 |
End bp | 2279328 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639835148 |
Product | hypothetical protein |
Protein accession | YP_982367 |
Protein GI | 121605038 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.104945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00594387 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAACTCA AACTCAAACT CAAGACCGTG CTCATGACCT CGATGGTTGC GGTGGCGGCC GGCCTCGCGG CCCCCGCGTC GGCGCAGGCG CCGTTTCCCG ACCGGCCGGT CTCGCTGGTG GTGCCGTTCG CGGCCGGCGG TCCGACCGAC GTGGTGGCGC GCATGATCGC CGTTCCCATG GGCAAGTCGC TGGGCCAGGC GGTGGTGGTC GAAAACGCGG TGGGCGCCGG CGGCACGATT GCCGCCACCA AGGTCGCGCG CGCCGCGCCC AACGGCTACA CCCTGTTCAT CCACCACATG GGCATGGCGA CGGCGCCGGC GCTCTACAAG AAGCTGGCGT TCGATCCGCT GAAGGATTTC GAGTACATCG GCCAGGTCGT CGATGTGCCG ATGACGCTGC TCGGACGCAA GGATTTTCCG GCCAATAACC TGCAGGAGCT GAAGGCCTAC ATCAAGGCCA ACCCGAACAA GGTGTCGCTG GCCAACGCCG GCCTGGGCGC GGTGTCGCAC CTGTGCGGCC TGCTGTTCAT GACCCAGCTG GGCGCCGAAC TCAACACCAT TCCCTACAAG GGCACCGGCC CGGCCATGAA CGACCTGCTC GGCGGCCAGG TCGATTTGCT GTGCGACCAG ACCACGCAGA CCGTGCCGAT GATCAAGGAA GGCCGCATCA AGGCGTTCGG CGTGACCACG CTCAAGCGCC TGTCGGCCCT GCCCAATGTG CCCACGCTCG ACGAGCAGGG CATGAAAGGT TTTGAAGTGA AGGTCTGGCA CGGCATGTAT GCGCCCAAGG GCACGCCCAA GCCAGTGCTC GACAAGATCA CCGCCGCGCT GCAAACGGCG ATGCAGGACC CGATGGTCAG GCAGCGCCTG GCGGACCTGA GTTCCGAGCC GGCGCCCATG GACAAGATCA ATGCCAGCGG CCTGAAGACC CACCTGGAAG CCGAAATCGC CAAGTGGGGG CCGGTGATCA AGAAGGCCGG CATTTACGCG GATTGA
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Protein sequence | MKLKLKLKTV LMTSMVAVAA GLAAPASAQA PFPDRPVSLV VPFAAGGPTD VVARMIAVPM GKSLGQAVVV ENAVGAGGTI AATKVARAAP NGYTLFIHHM GMATAPALYK KLAFDPLKDF EYIGQVVDVP MTLLGRKDFP ANNLQELKAY IKANPNKVSL ANAGLGAVSH LCGLLFMTQL GAELNTIPYK GTGPAMNDLL GGQVDLLCDQ TTQTVPMIKE GRIKAFGVTT LKRLSALPNV PTLDEQGMKG FEVKVWHGMY APKGTPKPVL DKITAALQTA MQDPMVRQRL ADLSSEPAPM DKINASGLKT HLEAEIAKWG PVIKKAGIYA D
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