Gene Pnap_2132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2132 
Symbol 
ID4687880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2270235 
End bp2271167 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content66% 
IMG OID639835143 
Productelectron transfer flavoprotein, alpha subunit 
Protein accessionYP_982362 
Protein GI121605033 
COG category[C] Energy production and conversion 
COG ID[COG2025] Electron transfer flavoprotein, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0421992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTT TAGTCATCGC AGAACACGAC AACGCCAGCA TCCGCCCCGC CACCCTGAAC 
ACCGTGACCG CTGCAGCGCA GTGCGGCGGC GAGGTGCATG TGCTGGTGGC CGGCCTGAAT
GCCGCCGCCG CAGCGCAGGC GGCCAGCCAG ATTTCCGGCG TCACCAAGGT CATTCATGTG
GACGGCGAGC ATTTCGCCCA CGGCCTGGCC GAGAACATGG CCGCCCAGGT GATTGCCATC
GCCAGCAGCT ACAGCCACAT CCTGTTCCCG GCCACGGCGT CGGGCAAGAA CATCGCCCCG
CGCGTCGCGG CCCTGCTCGA TGTCGGGCAG ATCTCCGACA TCACCAAGGT CGATGCGGCC
GATACGTTCG AGCGCCCGAT CTACGCGGGC AACGCCATTG CCATCGTGCA GAGCCTGGAT
GCTATCAAGG TCATCACCGT GCGCACGACC GGCTTTGACG CGGCGGCCGC TACGGGCGGC
AGCGCCGCCA TTGATGTCGT CAGCGGCGTG GCCGACAGCG GCAAGTCCTC GTTCCTCGGC
TCCGAAATCA CCAAGAGCGA CCGTCCCGAA CTGACGGCCG CCAAGATCAT CGTCTCCGGT
GGCCGGGCGC TGGGTTCGAG CGAGAAGTTC AATGAAGTGC TGATCCCGCT GGCCGACAAG
CTCGGCGCCG CGCTGGGCGC AAGCCGCGCG GCGGTCGATG CGGGTTACGC GCCCAACGAC
TGGCAGGTCG GGCAGACCGG CAAGATCGTC GCGCCGCAGC TCTACGTGGC CGTGGGCATC
TCGGGCGCCA TCCAGCATCT GGCCGGCATG AAGGACTCCA AGGTCATCGT CGCCATCAAC
AAGGACGGCG AGGCGCCCAT CTTCGGCGTG GCCGACTACG GGCTGGAGGC CGACTTGTTC
ACCGCCGTGC CGGAATTGAT TGGCGCACTG TAA
 
Protein sequence
MTSLVIAEHD NASIRPATLN TVTAAAQCGG EVHVLVAGLN AAAAAQAASQ ISGVTKVIHV 
DGEHFAHGLA ENMAAQVIAI ASSYSHILFP ATASGKNIAP RVAALLDVGQ ISDITKVDAA
DTFERPIYAG NAIAIVQSLD AIKVITVRTT GFDAAAATGG SAAIDVVSGV ADSGKSSFLG
SEITKSDRPE LTAAKIIVSG GRALGSSEKF NEVLIPLADK LGAALGASRA AVDAGYAPND
WQVGQTGKIV APQLYVAVGI SGAIQHLAGM KDSKVIVAIN KDGEAPIFGV ADYGLEADLF
TAVPELIGAL