Gene Pnap_2127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2127 
Symbol 
ID4688283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2265137 
End bp2266135 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content66% 
IMG OID639835138 
Producthypothetical protein 
Protein accessionYP_982357 
Protein GI121605028 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00713348 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTCACTT CCCCCCAGCC CCTGCTGCGC CGCCGCCTGA TCCAGGCGGC CACCGCCACC 
GTCTGCACCT TCGGCCTGGC CGGCACAGTC CTGGCCCAGG CGCCGGCCTG GCCCGCCAAA
CCCATCCGGA TCGTGGTCGG TTTCGCCCCC GGCGGCACGA CCGATGTCAT GGCCCGGGTC
ATGGCCCAAT CCCTCGGCGA GGCACTCAGA CAAACCGTGC TGGTGGACAA CAAGCCCGGC
GCAGGCGGCA ATGTGGCGGC TACCGAAGTC ATTCGCGCGC CGGCCGACGG CTACACCTTC
CTGATTGCGC CGACCTCGGT CGAGACGGCC AACCCTTTTC TCTTCAAGCA GACCATCAGC
CCGGCCAAGG ACCTGACCCC CGTGGCCGGC GTCGGACGCA GCCAGATGTA CCTGGTGGTC
AAGCCGCAGT CCACCTTCAA GGACGCCAGG GAATTCGTCG CCTATGCCCG GGCCAACCCG
GGCAAGCTGT CTTATGCCTC GGCCGGCCCC GGCACGCCGC CGCATCTGGC CGCCGAGATG
TTCAAGCGGG TGACCGGCAT TTTTGCCACC CACATTCCGT ACCGGGGCGC CGCGCCGGCC
TTGCAGGACG TGATGGCCGG CCAGGTGGAC TATGTGATGG ATCCGGGCAT TGCGTTTCCG
CATGTGCGTT CGGGCAAGGT CCGCATGCTG GCGGTGGCCG GGGCCAATCG TTCCTCTTTT
TTCCCCGATG TGCCGACGCT GGCCGAACTC GGCTTCAAGG GCGCCGAACT CGATATCTGG
TTTGGCATGT GGGCGCCCAA CGGCACGCCG CCCGACATCA CCGCCCGCAT GGTGCGCGAA
GTGGCCAAGG CCTTGAGCCT GCCAGCGACC AAGACCCGTT ATGAATCGCT GGGCGCCGAG
CCGGTCGGAC TGGGCAACGC CGAGTTCAAG AGCCTGCTGA CCAGCGAAAC CAAAATGCTG
TCCGCCCTGA TCAGGGACAG CAAGATCAAC GTGGATTGA
 
Protein sequence
MFTSPQPLLR RRLIQAATAT VCTFGLAGTV LAQAPAWPAK PIRIVVGFAP GGTTDVMARV 
MAQSLGEALR QTVLVDNKPG AGGNVAATEV IRAPADGYTF LIAPTSVETA NPFLFKQTIS
PAKDLTPVAG VGRSQMYLVV KPQSTFKDAR EFVAYARANP GKLSYASAGP GTPPHLAAEM
FKRVTGIFAT HIPYRGAAPA LQDVMAGQVD YVMDPGIAFP HVRSGKVRML AVAGANRSSF
FPDVPTLAEL GFKGAELDIW FGMWAPNGTP PDITARMVRE VAKALSLPAT KTRYESLGAE
PVGLGNAEFK SLLTSETKML SALIRDSKIN VD