Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2122 |
Symbol | |
ID | 4688313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2259895 |
End bp | 2260404 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639835133 |
Product | MarR family transcriptional regulator |
Protein accession | YP_982352 |
Protein GI | 121605023 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000649422 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.111554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTTACC CTAATGAAAA TGCTGTTTCT GTGCGGACGG AACTGGCCAA CAGGTTGTTC TTTCGCTTGT ATCAATGTAC CAATATGTTG CATAAAACCG GGACGCGCGC GGTAGAGGCC GAAGGCCTGA CCACGCAGCA GTGGGCGGTG CTGGGCGCCT TGTCGCGGCC GGAAGCCGAG GGCGGCATGA GCGTCGGGGA TCTGGCCCGC TACCTGATGG TGAGCCGCCA GAACCTGGCG GGGCTGATCA GCCGGATGGA GCGCGACGGG CATATTTGCA CTGCCCCCGA TGGGCGCGAC CGCCGTTCGC GCCTGGTGAC GATGACGGCG TCAGGCCGGG AGGTCTGGGC CGTGAAGGCG CAGCCCAAGA TTCATGACTA TTACGAGCAG GCACTGGAAG GTTTTTCGAC CAACGACCTC ACCCATACGC TGCACTACCT GCTCAAGCTG CTGGAGAACA TGAAGCGTCT TGATGACGAC AAAGAACCCA CCCAGACGAA TGAACCCTGA
|
Protein sequence | MVYPNENAVS VRTELANRLF FRLYQCTNML HKTGTRAVEA EGLTTQQWAV LGALSRPEAE GGMSVGDLAR YLMVSRQNLA GLISRMERDG HICTAPDGRD RRSRLVTMTA SGREVWAVKA QPKIHDYYEQ ALEGFSTNDL THTLHYLLKL LENMKRLDDD KEPTQTNEP
|
| |