| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2119 |
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| Symbol | |
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| ID | 4688394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2256813 |
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| End bp | 2257997 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639835130 |
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| Product | muconate and chloromuconate cycloisomerases |
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| Protein accession | YP_982349 |
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| Protein GI | 121605020 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR02534] muconate and chloromuconate cycloisomerases |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.380103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.138731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGTC GTTTTCCGAT TGAGCGCATC GAGGCGCGGA TTCTGGACAT TCCCACCATC
CGTCCGCACA AGCTGTCGTT TGGCTCAATC AGCCGCCAAA GTCCCGTCAT TGTCCAGCTC
TGGCTGGCCA ACGGCGCTTG CGGTTTCGGC GAGGCGGCCA CCATTGGCGG GCCGTCGTGG
AACGAAGAGT CGCCCGAAGG CATCCAGCAT GCCATCAGCG CCTACCTTGC ACCCGCGCTG
CTGGGCCAGG ACGGCGCCTG CTTTGAAACC GCGCTGACCC GCATGGACCT GGCCTGCAAG
GGCAACGCCT TTGCCAAGAG CGCCGTGGAA ATGGCGCTGA TCGACGCCGT GGCGCGCTCA
TTGAGTCTGC CGGCCTGGCA ACTGCTGGGC GGCAAGCGCC ACCAGAGCCT GCCCCTGGCC
TGGACGCTGG CCAGCGGCGA CGTGGACCGT GACCTCGAAG AAGCCCAGCT GCGCCTGGAG
CAAAAGCGCC ACCGCATCTT CAAGATGAAG ATCGGCGCCC GCAGTCCGGC ACAGGACGTG
GCCCATGTGT CGCAAATCGC GCGCGGCCTG GCAGGCCGGG CCACGCTGAC GGTCGATGTC
AACCAGGCCT GGGACGGCAG CACCGCGCGC CGCTACCTGC CGCAACTGAT TGATGCCGGC
GTCACCCTGA TCGAGCAACC CGTGGCCAGG TGGAACGTGG AAGCGCTCAA GACGCTGACT
GCCACGCTGG GCAACCGTGC CAGCATCATG GCCGATGAAA CCGTCTGCAC CCCGCAGGAC
GCCATGCTGC TGGCACGCGC CCAGGCCTGC CATGTGTTCT CGCTCAAGGT GGCCAAGCAT
GGCGGCCTGC TGCGCACGCG CCAGGTGGCG GCCGTGGCCG ACGCGGCCGA CATCGGCTGG
TACGGCGGCA CCATGCTGGA AACTTCCATC GGCAGCGCGG CCTCCGCGCA CCTGTTCTCC
ACGCTGGGCA CGCAGCACCA CGGCTGCGAG CTGTTTGGCC CGCAGCTGCT AGTGGACGAC
CTCGTCACCG AACGCATGGC GATTCGCGAC TTCGAGCTGC AGTTGCCCGA TGGCCCCGGC
TTTGGCGTCG AGGTGGACAT GGCCCAGCTC AATCGTTTTG ACCGCGCCCG TACCGGCCAG
GCGCAAGTAC ACATCGACCT CGGCCACCGC GCCGCTACTC TTTAA
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| Protein sequence | MTSRFPIERI EARILDIPTI RPHKLSFGSI SRQSPVIVQL WLANGACGFG EAATIGGPSW
NEESPEGIQH AISAYLAPAL LGQDGACFET ALTRMDLACK GNAFAKSAVE MALIDAVARS
LSLPAWQLLG GKRHQSLPLA WTLASGDVDR DLEEAQLRLE QKRHRIFKMK IGARSPAQDV
AHVSQIARGL AGRATLTVDV NQAWDGSTAR RYLPQLIDAG VTLIEQPVAR WNVEALKTLT
ATLGNRASIM ADETVCTPQD AMLLARAQAC HVFSLKVAKH GGLLRTRQVA AVADAADIGW
YGGTMLETSI GSAASAHLFS TLGTQHHGCE LFGPQLLVDD LVTERMAIRD FELQLPDGPG
FGVEVDMAQL NRFDRARTGQ AQVHIDLGHR AATL
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