Gene Pnap_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2118 
Symbol 
ID4688493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2256523 
End bp2256801 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content59% 
IMG OID639835129 
Productmuconolactone delta-isomerase 
Protein accessionYP_982348 
Protein GI121605019 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4829] Muconolactone delta-isomerase 
TIGRFAM ID[TIGR03221] muconolactone delta-isomerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.561407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.255303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTTT TAGTTCGTAT GGATGTGAAC ATCCCGCGTG ATCTGCCCGC CGACGAGGCC 
AACGAGATCA AGGCCCGCGA AAAGGCCTAT TCACAAGACC TGCAGCGCGA CGGCCGCTGG
AAGAGCATCT GGCGCGTGGT CGGCGAATAT GCCAACTACA GCATTTTCGA TGTGTCGTCG
AATGACGAGC TGCACCAGCT GCTGCAAGGC CTGCCCCTGT TCCCGTTCAT GAAGATCGAC
GTGACGCCGC TGGCAGCCCA CCCCTCGGCC ATTGCCTGA
 
Protein sequence
MLFLVRMDVN IPRDLPADEA NEIKAREKAY SQDLQRDGRW KSIWRVVGEY ANYSIFDVSS 
NDELHQLLQG LPLFPFMKID VTPLAAHPSA IA