| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2108 |
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| Symbol | |
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| ID | 4689067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2247411 |
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| End bp | 2248775 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639835119 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_982338 |
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| Protein GI | 121605009 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0152433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.3868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACAAA TTGACGTTCA CAAGCTGTCC GACGAGGCCA GATTCAATGG CTTTCACGGC
AAGGTGCTGT TGTGGTGCGC CCTGATCATC ATCTTTGACG GCTACGACCT GGCGGTGGCC
GGCATCGCGC TGCCCTCGAT CATGAAGGAG ATGGGCGTCA CCGCCCAGAA CGCCGGCTTC
ATGGTCAGCT CGGCCCTGTT CGGCATGATG TTCGGCGCCA TCTTTCTGGG CACCATCGCC
GACAGGATCG GCCGGCGCAA GGCCATCGCG ATCTGCATCT TCCTCTTCAG CGTGTTCACC
GCCGCAGCGG GCTTTACCGA CAACCCCTAC ACCTTCAGCG CGATGCGCTT CCTGGCGGGC
CTGGGCATAG GCGGCGTCAT GCCCAACGTC GTGGCGCAGA TGACCGAGTA TTCACCGAAG
AAGATTCGCG CCACCATGGT CACGCTGATG TTCAGCGGCT ATGCCGTGGG CGGCATGCTG
GCCGCCTTGC TGGGCAAGGG GCTGATCGAA GCCTACGGCT GGTCGTCCGT CTTCCTGGCC
GCCGGTTTGC CGGTGATTTT GATCCCGTTC GTGCTGAAGT CGATGCCCGA GTCGATGCCC
TTCCTGATCA AGGAAAACCG GCTCGACGAA CTGAAGAACA TCGTCTCGCA GATGTCTCCT
GGCTACCGGC CCCAATCCGA TGACCGCTTC GCGCTGCCCT CGGCAGACAA GGCCGAAGGC
GCTCCGATTG GCAAGCTGTT CCAGGATGGC CGGGGTTTCA GCACCGTGAT GTTCTGGGTC
ACCTTCTTCA TGTGCCTGTT CATGGTCTAT GCCCTCAGCT CGTGGCTGAC CAAGCTGATG
GCGAGCGCCG GCTACAGCCT GGGCTCTGCG CTGACCTTTG TGCTGGTGCT CAACTTCGGC
GCCATGATCG GCGCGGTCGG CGGCGGCTGG CTGGCTGACC GCTTCCACAT CAAGTATGTG
CTGGTGGGCA TGTACGCGCT GGCGGCGGTG TCGATCACGC TGCTGGGCTA CAAGGTGCCG
ACCGAAGTGC TGTTCCTGCT GGTCGGGCTG GCCGGCGCAT CGACGATTGG CACGCAGATC
GTCACCTATG CCTATGCCGG CCAGTTCTAC CCGATGGCGA TCCGTTCGAC CGGCATCGGC
TGGGCGTCGG GCGTGGGCCG CAGTGGCGCC ATCCTGGCGC CGATCGTGAT CGGCACGCTG
GTGGGCATGT CGCTGCCGCT GGAGCAAAAC TTCATGGCCA TTGCCATTCC CGCCGTGATC
GCGATGATTG CCGCGTCGAT GATCAACCAC CGCCGCTCCG CCTCGGCCAG CCATGACAGC
GTGAGCGTGC TGACGCCTGC GGCTTCAGCG ATGGCGGGCA AGTAG
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| Protein sequence | MRQIDVHKLS DEARFNGFHG KVLLWCALII IFDGYDLAVA GIALPSIMKE MGVTAQNAGF
MVSSALFGMM FGAIFLGTIA DRIGRRKAIA ICIFLFSVFT AAAGFTDNPY TFSAMRFLAG
LGIGGVMPNV VAQMTEYSPK KIRATMVTLM FSGYAVGGML AALLGKGLIE AYGWSSVFLA
AGLPVILIPF VLKSMPESMP FLIKENRLDE LKNIVSQMSP GYRPQSDDRF ALPSADKAEG
APIGKLFQDG RGFSTVMFWV TFFMCLFMVY ALSSWLTKLM ASAGYSLGSA LTFVLVLNFG
AMIGAVGGGW LADRFHIKYV LVGMYALAAV SITLLGYKVP TEVLFLLVGL AGASTIGTQI
VTYAYAGQFY PMAIRSTGIG WASGVGRSGA ILAPIVIGTL VGMSLPLEQN FMAIAIPAVI
AMIAASMINH RRSASASHDS VSVLTPAASA MAGK
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