Gene Pnap_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2105 
Symbol 
ID4688455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2243647 
End bp2244129 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content60% 
IMG OID639835116 
Producthypothetical protein 
Protein accessionYP_982335 
Protein GI121605006 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.280829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.310588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAG TCACCCAACC CGCCAATGTC AAAGGCGACT TCCTTGTCGA TTACGAAGAA 
AAAGTCTTTG AGGACGTGAA AGCCGAGCCG GGCGACAAGG CCCTGGTCAC TTTCCATACC
GTGGCGTTTG AAGGCTCCAT CGGTTTCGTC AACCTGCTGC AAGCCACCCG GCTCCAGCGC
AAGGGCTATG AGACCTCGAT TCTGTTGTAC GGCCCGGGCG TCACGCTTGG CGTGCAGCGC
GGCTTTCCCA AACTGGGTGA TGAAGCCTTT CCTGGCCACC AGAACCTCAA CAACCAGATC
ACCAAGTTCA TGGCCGAAGG CGGCAAGGTC TATGCGTGCC GCTTCGCGCT GCAGGCGCTG
TACGGCCACG GGGAGGGCGC CTTGATTCCG GGTATCACGC CGATCAGCCC GCTGGACGTG
CTGGACCTGA TGCTGCTGCA CCGCAAGCAG GGCGCGGTCA TTCTCGACAC CTGGACGCTG
TAA
 
Protein sequence
MPKVTQPANV KGDFLVDYEE KVFEDVKAEP GDKALVTFHT VAFEGSIGFV NLLQATRLQR 
KGYETSILLY GPGVTLGVQR GFPKLGDEAF PGHQNLNNQI TKFMAEGGKV YACRFALQAL
YGHGEGALIP GITPISPLDV LDLMLLHRKQ GAVILDTWTL