Gene Pnap_2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2104 
Symbol 
ID4688746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2242571 
End bp2243632 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content65% 
IMG OID639835115 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_982334 
Protein GI121605005 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.983215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.262384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCA CACCCCGTAT AGTGCGCGCG GCCGCTGTGC AGATCGCGCC CGACCTGGAG 
CGCCCGCAAG GCACGCTGGA CCGCGTGTGC AGTGCCATCG ACGACGCGGC AGCCCAGGGA
GCGCAGCTGG TGGTCTTCCC CGAGACCTTC CTGCCCTACT ACCCCTACTT CTCCTTTGTC
GTTCCGCCCG TTCAGCAAGG CCCCGCCCAC CTGCGCCTGT ATGAGCATGC GGTGGTGGTG
CCCGGCCCGG TGACAGCGGC GGTGGCCGAG CGGGCAAAGG CACATGGCGT GGTCGTGGTG
GTGGGCGTCA ACGAGCGTGA CCATGGCAGC CTGTACAACA CCCAGCTGGT CTTTGACGCC
GATGGCAGCC TGGTCCTCAA GCGCCGCAAG ATAACGCCCA CTTACCACGA GCGCATGGTC
TGGGGCATGG GCGATGGCGC CGGGCTGAAG GTGGCCGACA CGGCTGTCGG CCGCGTCGGT
GCGCTGGCCT GCTGGGAGCA TTACAACCCG CTGGCGCGCT ACAGCCTGAT GGCGCAGCAT
GAGGAAATCC ACTGTGCGCA GTTTCCAGGC TCGCTGGTCG GGCCGATCTT TGCCGACCAG
ATGGAAGTCG CCATCCGCCA CCATGCGCTG GAATCGGGTT GCTTCGTGGT CAACGCCACG
GGCTGGCTGA CCGATGCGCA GATTGAATCC ATCACCCCCG ACCAGAGCCT GCAAAAGGCC
CTGCGCGGCG GCTGCCACAC CGCCATCATC TCGCCCGAAG GCAAGCACCT GGCAGCGCCC
CTGACCGAAG GCGAAGGCAT GGTGATCGCC GACCTTGACA TGGCGCTGAT CACCAAGCGC
AAACGCATGA TGGATTCAGT GGGCCACTAC GCCCGGCCCG AACTGCTGAG CCTGGCAATC
AACGCCGAGC CTGCCCAAAC CATGCGTCCC ATGCACGCAA GCCCTTCTCT TTCCACTTCA
AGGAGTCCCG ACCATGAGTA CCCACCAGCC CAGCCACGCA CCTTCGGCCG CGAACCGGCA
ACTGATGACC GAGCTGCAAT CCTTCGGACT GCGGCTGGCT GA
 
Protein sequence
MTSTPRIVRA AAVQIAPDLE RPQGTLDRVC SAIDDAAAQG AQLVVFPETF LPYYPYFSFV 
VPPVQQGPAH LRLYEHAVVV PGPVTAAVAE RAKAHGVVVV VGVNERDHGS LYNTQLVFDA
DGSLVLKRRK ITPTYHERMV WGMGDGAGLK VADTAVGRVG ALACWEHYNP LARYSLMAQH
EEIHCAQFPG SLVGPIFADQ MEVAIRHHAL ESGCFVVNAT GWLTDAQIES ITPDQSLQKA
LRGGCHTAII SPEGKHLAAP LTEGEGMVIA DLDMALITKR KRMMDSVGHY ARPELLSLAI
NAEPAQTMRP MHASPSLSTS RSPDHEYPPA QPRTFGREPA TDDRAAILRT AAG