Gene Pnap_2101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2101 
Symbol 
ID4688400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2239928 
End bp2240953 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content67% 
IMG OID639835112 
ProductAIR synthase related protein 
Protein accessionYP_982331 
Protein GI121605002 
COG category[R] General function prediction only 
COG ID[COG2144] Selenophosphate synthetase-related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.183279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATC TCCATCTCCA TCTCCATCTG CTACCGCTCC CGGCATTGAC GGCCGCCCTG 
GTGGCCGGGC GCGGCTTTGC GCACAAACGC GACATTGGTG ATGCCATGCG CGTGCTGTCC
CGCGCCTTGC CCGATGCGAC GCATCAGCGG GACCAGGCCG TCGCGCTGGG CGACGACTGC
GCCGCGATTC GCGACGGTGA TGGTTATCTG CTGTTCGCCA TCGAGGGCTT TGTCGATGAT
TTCGTGCAGC GCATGCCCTG GTTTGCCGGC TACTGCGGCG TGATGGTCAA CGTGAGCGAC
ATCTACGCCA TGGGCGGGCG GCCCATCGCC GTGGTCGATG CCATCTGGAG CCAGGGCGCG
GGCACGAGCG AGCAGGTGAT GGTCGGCATG GCCGAAGCCT CGCGGCGCTA CGGCGTGCCC
ATCGTCGGCG GCCATACCAA CCACCGCAGC GACCACGGCC AGCTGGCGGT GGCCATCCTG
GGCCGGGCGC GCAAGCTGCT GACCAGCTTC GATGCCCTGC CAGGCCACCG CTTGCTGATG
GCCATCGACC TGCGGGGCGC TTACCAGGAA CCCAATCCGT ACTGGGATGC CTCCACCAGC
GCCCCGGCCG AACGCTTGCG CGCCGACCTG GAATTGCTGC CAATCCTCGC CGAGGACGGT
TTGTGCAACG CCGCCAAGGA CATCAGCATG GCCGGCGCGG TGGGCACCGC GCTGATGCTG
CTGGAGTGTT CCGAAGTGGG CGCGATGATT GACATCGAAG CCATCCCTCG GCCCCTGGGC
GTGCCCCTGC TGCGCTGGTT GCAGTCCTTC CCCAGTTTTG GCTTTGTGCT CAGCGTGCGG
CCCGAAGTCG CCGACGAGGT CGTCGCACGT TTCCACGCCC GTGGCATTGC CTGTGCCGAT
GTGGGGGAGG TCAGCGCCGC ACCGCAGGTC TGGCTGCGCC AAGGCCAGGA AACTTCTTTG
CTGTGGGACG TTGCCGCCCA GCCTTTCATC CGGGCACGCC CGGCGCAGGA GCCTGGCAAT
GCATGA
 
Protein sequence
MSHLHLHLHL LPLPALTAAL VAGRGFAHKR DIGDAMRVLS RALPDATHQR DQAVALGDDC 
AAIRDGDGYL LFAIEGFVDD FVQRMPWFAG YCGVMVNVSD IYAMGGRPIA VVDAIWSQGA
GTSEQVMVGM AEASRRYGVP IVGGHTNHRS DHGQLAVAIL GRARKLLTSF DALPGHRLLM
AIDLRGAYQE PNPYWDASTS APAERLRADL ELLPILAEDG LCNAAKDISM AGAVGTALML
LECSEVGAMI DIEAIPRPLG VPLLRWLQSF PSFGFVLSVR PEVADEVVAR FHARGIACAD
VGEVSAAPQV WLRQGQETSL LWDVAAQPFI RARPAQEPGN A