Gene Pnap_2098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2098 
Symbol 
ID4688928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2237053 
End bp2238345 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content64% 
IMG OID639835109 
ProductFAD dependent oxidoreductase 
Protein accessionYP_982328 
Protein GI121604999 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.963187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.59787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTC ATGCCCAGCC TACCCACCAC AGCGTCGTCA TCGTCGGCGG CGGACAAGCC 
GGGCTGTCGC TCAGCTACTA CCTGCAGCAG CGCAGCATCG ACCATTTGGT GATCGAAAAA
CACTCGCCCA TGCATGCCTG GCGCAGCCAG CGCTGGGACG CGTTCAGCCT GGTCACGCCC
AACTGGCAAT GCGCCTTGCC TGGCTGGCCC TATGCCGGCT CCGACCCGCA TGGTTTCATG
AAGAAGAGCG AAATCATCGA CTACCTGGAC GGCTTCAGGC AGCATGTGAA CGCTCCGTTG
CTCCAGGGCG CTGCTGTGCA GCGAGTGACG CCGCGTGGTT CCAATGGTTT TAACGTGATC
ACCTCGGCAG GCGAAGTCAC TGCCGATCAA GTCGTGGTGG CCTCGGGCGG CTACCACCAG
CCCATCATCC CCCGCATGGC CGAGCGTTTG TCCAAAGACA TCCTGCAACT GCACTCCGAG
CAGTACCGCA GCCCGGCAGC CATGCCCGAA GGCACGGTGC TGGTCGTGGG CTGCGGTCAG
TCCGGCGCGC AGATCGCCGA AGACCTGCAT CTGGCCGGGC GCAAGGTCGT GCTGGCAACG
GGCAACGCAC CGCGCTGCGC CCGCTTTTAC CGTGGCAAGG ATGTGGTCGA CTGGCTGGCC
GACATGGGCT ACTACGACAT GCCGGTGCAT GAGCACCCCT TGCGCGAAGG CGTGCGCGAC
AACACCAACC ATTACGTGAC CGGCCGCGAT GGCGGGCGCG ACATTGATCT GCGCAAGTTT
GCCGCCGAAG GCATGGCGCT TTATGGCTTG CTGACAGGCC TGGAGGGCGA GACGCTGCAA
TTTGACGCTA ACCTGCAAGA AAACCTCGAC CATGCCGACG GCGTCTACAA CCGCATCAAC
GAATCCATCG ACAAGTACAT CGCCAAGGCA GGCATCGACG CGCCCCCGGG TGAACGGTAC
GAGCCCGTGT GGCAGCCGCA AGGCGAACGC CGGACCTTGA ACCTTCGCGA GGCGGGCATC
ACCTCGGTCA TCTGGTGCAT TGGCTTTCAG CCCGATTTTG GCTGGCTCGA CTTGCCGGTC
TTCAATGGCC GCGGCCAACC CGGCCATGTG CGCGGGGTCA CCGCCCAGGC CGGGCTCTAT
TTCCTGGGGC TGCCGTGGCT GCACACCTGG GGTTCGGGGC GTTTCTCGGG GATTGCGCGT
GATGCGCTGT ACCTGGCCGA GCAGATCGAG GCGCGCACCG GCGCCTCTGA AGCAACGGCC
GACATGGAGC AGGCAGAAGT CCTGCTGTCA TGA
 
Protein sequence
MSVHAQPTHH SVVIVGGGQA GLSLSYYLQQ RSIDHLVIEK HSPMHAWRSQ RWDAFSLVTP 
NWQCALPGWP YAGSDPHGFM KKSEIIDYLD GFRQHVNAPL LQGAAVQRVT PRGSNGFNVI
TSAGEVTADQ VVVASGGYHQ PIIPRMAERL SKDILQLHSE QYRSPAAMPE GTVLVVGCGQ
SGAQIAEDLH LAGRKVVLAT GNAPRCARFY RGKDVVDWLA DMGYYDMPVH EHPLREGVRD
NTNHYVTGRD GGRDIDLRKF AAEGMALYGL LTGLEGETLQ FDANLQENLD HADGVYNRIN
ESIDKYIAKA GIDAPPGERY EPVWQPQGER RTLNLREAGI TSVIWCIGFQ PDFGWLDLPV
FNGRGQPGHV RGVTAQAGLY FLGLPWLHTW GSGRFSGIAR DALYLAEQIE ARTGASEATA
DMEQAEVLLS