| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2093 |
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| Symbol | |
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| ID | 4689001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2231037 |
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| End bp | 2232458 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639835104 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_982323 |
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| Protein GI | 121604994 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.132381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.73636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCT ATGAAGCACT GGCCAGCGAA ATTGCAACTT CCATCCAGAC CGGCGTCCTG
CGACCCGGTG ACCGCCTGCC GTCAGTGCGG CAAGCCAGTG CCAGCCGAGG CGTGAGTCCG
TCCACCGTGT TCCAGGCTTA CTACCTGCTG GAGGCCAAAG GCCTGGTTCG GGCGCGCGAA
CGCTCGGGCT ACTACGTGGC GCCAGGCGTT CGCCAGTTTC CGCCCGAGCC TGACATGGCC
TCAAGGCCGC CCGACGAAGC CGTCGCGCTG AACGTGAGCG AACTGGTGTT CGAGGTGCTG
CAGTCCACCA TGGCGCGTGA CGTGGTGCCT CTGGGTTCAG CCTTTCCCAG CCCTTTGCTG
TACCCGCTGG CCCGGCTGGG AAAAGTGATG GCCGCCTGCG TGCAAAAGCT CGATCCGTGG
GCCACGGTGG ATGACCTGAC ACCAGGCAAT GCCGGGCTGC GGCGGCAAAT TGCCCTGCGC
TACCTGGCCG ACGGGCTGCA TGTGCACACC GACGAAATCG TCATCACCAA TGGCGCGCTG
GAAGCGCTGA ACCTGTGCCT GGAAACGGTC ACCCGTCCCG GCGATGCGGT GCTGGTCGAG
TCGCCCACCT TCTATGCCGC CTTGCAGGCA CTCGAGCGGC TCGGGCTCGA TGCCATCGAG
GTGCCCACGC ATCCGCGTGA AGGCATCGAG TTGGCCGCCC TGGAGCATGC CTTGGCGCGG
CACCAGCCCA AGGCTTGCTG GCTGATGACC AATTTCCAGA ACCCGCTGGG CAGCTTGATG
CCCGACAGCA AGAAAAAGGC GCTGGTCGAA CTGCTGACGC GCCACCAGGT GCCGCTGATC
GAGGACGATG TGTATGGCGA ACTGTATTTC GGCGACAAGC GGCCCATGCC CGCCAAGGCC
TTCGACACCG AAGGACTGGT CATGCACTGC TCTTCCTTTT CAAAATGCCT GGCGCCGGGC
TACCGCATCG GCTGGGCCGC GCCGGGTCGC TTTGCGGGCC GGGTCGCCCG GCAAAAACTC
ATCACCAACC TGGCCACTTC GGCGCCAGCC CAGGTCACGC TGGCCGCCTA CCTCGAAAAA
GGGGGCTACG ACAAGCACCT GCGCAAGCTG CGGCATACCC TGCAAGCGCA GCAAGCCCAG
TTCGCCCAGG CGCTGGGCCA CCACTTTCCG CCAGGAACCC GCGCAACGCG ACCTGCCGGT
GGCTACTTTT TGTGGATAGA GTTGCCCGAT CAGGTGAGCG CCCTGGAGAT TCACCGCCAG
GCCCTGTCGC TGGGCATCAG CGTGGCGCCG GGGCCGATCT TTTCGGCCAA GCAGGGCTTT
GCCAACTGCC TGCGCCTGAA CTATGGCCAT GTGTGGGACG AACGAACGGA ACGGGCCGTT
GCAACGCTAG GTCAACTGGT TCGAACTCAG AGTAACCGAT GA
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| Protein sequence | MKRYEALASE IATSIQTGVL RPGDRLPSVR QASASRGVSP STVFQAYYLL EAKGLVRARE
RSGYYVAPGV RQFPPEPDMA SRPPDEAVAL NVSELVFEVL QSTMARDVVP LGSAFPSPLL
YPLARLGKVM AACVQKLDPW ATVDDLTPGN AGLRRQIALR YLADGLHVHT DEIVITNGAL
EALNLCLETV TRPGDAVLVE SPTFYAALQA LERLGLDAIE VPTHPREGIE LAALEHALAR
HQPKACWLMT NFQNPLGSLM PDSKKKALVE LLTRHQVPLI EDDVYGELYF GDKRPMPAKA
FDTEGLVMHC SSFSKCLAPG YRIGWAAPGR FAGRVARQKL ITNLATSAPA QVTLAAYLEK
GGYDKHLRKL RHTLQAQQAQ FAQALGHHFP PGTRATRPAG GYFLWIELPD QVSALEIHRQ
ALSLGISVAP GPIFSAKQGF ANCLRLNYGH VWDERTERAV ATLGQLVRTQ SNR
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