Gene Pnap_2057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2057 
Symbol 
ID4689994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2184019 
End bp2184750 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content62% 
IMG OID639835068 
ProductABC transporter related 
Protein accessionYP_982287 
Protein GI121604958 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAGG TGATTCACGT TAAAGGCCTG ACCAAGCTGT TTGGCAGGCA TGCGGTGCTG 
CGCGGCATTG ACTGCGCCAT CAAGGCCACC GAAGTGGTGT GCGTGATCGG GCCGTCAGGC
TCGGGCAAGA GCACTTTCCT TCGCTGCCTG AATGGACTGG AAGATGCATC AGGCGGCGAG
GTGCTGGTGC ATGGCGTGTC GGTGCATGAA CCGAAAACCG ATGTCGATGC GCTGCGCTCG
GAAATCGGCA TGGTGTTCCA GCGCTTCAAC CTGTTCCCGC ACAAGACCGT GCTTGAAAAC
ATCATGCTGG CGCCGTGCAA GGTGCGCGGC CTGACCACGG CCCAGGCCCG GCTGCGCGCC
AGCGAATTGC TGGAAAAAGT CGGGCTGCTG GAGAAGATCG ACGCCTACCC CAATCAGTTG
TCAGGCGGGC AGCAGCAGCG CGTGGCGATT GCGCGGGCGC TGGCGATGCA GCCGCGCATC
ATGCTGTTTG ACGAACCCAC TTCCGCGCTG GACCCTGAAA TGGTCGGCGA GGTGCTGGCC
GTCATGCAGG CGCTGGCCGA GGAAGGCATG ACCATGGTGG TCGTGACGCA CGAGATGGGC
TTTGCCCGCC AGGTGGCCGA CCGGGTGCTG TTCATCGACG AAGGCGTGGT GGTGGAAGAA
GGAACGCCGG CCGCGATTTT TGACAACCCG CAGGAAGACC GGACACGCCG TTTCCTGAGC
AAGGTTCTGT AG
 
Protein sequence
MEEVIHVKGL TKLFGRHAVL RGIDCAIKAT EVVCVIGPSG SGKSTFLRCL NGLEDASGGE 
VLVHGVSVHE PKTDVDALRS EIGMVFQRFN LFPHKTVLEN IMLAPCKVRG LTTAQARLRA
SELLEKVGLL EKIDAYPNQL SGGQQQRVAI ARALAMQPRI MLFDEPTSAL DPEMVGEVLA
VMQALAEEGM TMVVVTHEMG FARQVADRVL FIDEGVVVEE GTPAAIFDNP QEDRTRRFLS
KVL