Gene Pnap_2051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2051 
Symbol 
ID4689730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2177331 
End bp2178173 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content52% 
IMG OID639835062 
Productglycosyl transferase family protein 
Protein accessionYP_982281 
Protein GI121604952 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA GCTTTATTGT TCTGACCTAC AACAGGACAG ATGCGTTGCT TGCCGTCCTG 
CGCTCTTTGG CAGAGCAATG CAATCCAGAA CACGAAGTCT TGATTGCTGA TGATGGTTCC
AGGCAGGATC AGGTTGAAAT GCTATTAGAG CGTTGTCCTG CGTTCTCCTG CCCGGTGCGC
CACGTCTGGC ATCCGGATGT CGGGTTCACC GCCGCAGGAG CGCGCAATCT GGCGGCCCAT
GTGGCGAAAG GTGACTACCT GGTTTTTCTT GATGGAGACT GCATTCCGAA CAAGTCATTT
GTCGCCTGGC ACACCCTTCT TGCCGAGTCC GGATTTTTTG TCAATGGAAG CCGGGTTTTG
TTGAATAAAA CCCTCACTGC CGAAGTGCTC AGTGGCGAAG TAAACCTGCC ACATTGCTCT
GCTTTTTTCT GGTTCCGGGC TCGTTTCCAG GGCGATAGCA ACAAATTGTT GCACCTCATT
CGCTGGCCGC TGTCTTTATT CAGGGTACAA CAAGACTTTC AATGGCGCGG GATTCGAAGC
TGCAACTTCG GCGTTTGGCG ACATGATTTC GTCAGTGTCA ACGGCTTCGA CGAGACTTTC
CAGGGATGGG GCCATGAAGA CGCCGACCTT GTTCTTCGCC TCCATCATCT GGGCCTCAAG
CGGAAAAACG GCTTCATGGC TACCGAGGTG TTTCATCTCT GGCACCCCGA AAGCAAGCGT
GACCAGGAAT CGGTCAATAA AAACCGCGTC ATGGCACGCA TGAAAACCAA TCTTGTCCTG
GCGGAAAAAG GACTTCGGGA ACTCGACACT GCGGCGCCCC TCAAAATAAC TCAATTGCAC
TGA
 
Protein sequence
MKISFIVLTY NRTDALLAVL RSLAEQCNPE HEVLIADDGS RQDQVEMLLE RCPAFSCPVR 
HVWHPDVGFT AAGARNLAAH VAKGDYLVFL DGDCIPNKSF VAWHTLLAES GFFVNGSRVL
LNKTLTAEVL SGEVNLPHCS AFFWFRARFQ GDSNKLLHLI RWPLSLFRVQ QDFQWRGIRS
CNFGVWRHDF VSVNGFDETF QGWGHEDADL VLRLHHLGLK RKNGFMATEV FHLWHPESKR
DQESVNKNRV MARMKTNLVL AEKGLRELDT AAPLKITQLH