| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2020 |
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| Symbol | |
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| ID | 4689434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2147972 |
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| End bp | 2150305 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639835028 |
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| Product | lysine decarboxylase |
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| Protein accession | YP_982250 |
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| Protein GI | 121604921 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.605875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCCG ACAGGTTCTG GGCACCCTCA ACTGCTGCAT ACGCCATGAA ATTTCGCTTT
CCGATTGTCA TCATCGACGA GGACTTCCGT TCTGAAAACA CCTCGGGACT GGGCATACGC
GCACTCGCCC AGGCCATAGA AAGCGAAGGC TTCGAGGTGC TGGGCGTCAC CAGCTACGGT
GACTTGTCGC AGTTCGCGCA GCAGCAAAGC CGTGCCAGCG CCTTTATTTT GTCGATTGAC
GATGAAGAGT TCACGCCCGG TCCCGATCTG GACCCGGCCG TGCTCGACCT GCGCAACTTC
ATTGCCGAGG TGCGCCGAAA AAACCTGGAC GTGCCGATTT ACGTTTATGG CGAGACCAAG
ACCTCGCGCC ATATCCCGAA CGACATCCTG CGCGAGCTGC ACGGCTTCAT CCACATGTTC
GAGGACACGC CCGAGTTCGT GGCGCGCCAC ATCATCCGCG AGGCCAAAAG CTACCTCGAA
GGCGTGCAGC CGCCGTTTTT CAAGGCGCTG CTGGACTACG CCGAGGACGG CTCCTATTCA
TGGCATTGCC CCGGCCATTC CGGCGGCGTT GCTTTCCTGA AAAGCCCGGT CGGGCAGATG
TACCACCAGT TCTACGGCGA GAACATGCTG CGCTCGGACG TCTGCAACGC GGTGGAAGAG
CTGGGCCAAC TGCTCGACCA CAACGGCGCC ATCGGCGCCA GCGAGCGCAA TGCGGCGCGC
ATCTTCAATG CCGACCATTG CTTTTTCGTG ACCAACGGCA CGTCAACGTC CAACAAGATG
GTCTGGCACC ATACCGTGGC GCCGGGCGAC GTGGTGGTGG TGGACCGCAA CTGCCATAAA
TCGATCCTGC ACGCCATCAT CATGACCGGC TCGATCCCGG TGTTCCTCAA GCCCACGCGC
AACCATTTCG GCATCATCGG CCCGATTCCG CAAAGCGAAT TCGAGCCCGA GGCGATTCGC
GCCAAGATTG CCGCCAACCC CTTGCTCAAG GGCGTTGATG CCGCCACCGT CAAGCCACGC
GTGCTGACGC TGACCCAATC GACCTACGAC GGCGTGCTCT ACAACACCGA GACCATCAAG
GGCATGCTCG ACGGCTACAT CGACAACCTG CACTTTGACG AAGCCTGGCT GCCGCACGCC
GCTTTCCACC CGTTCTACGG CACCTACCAC TCGATGGGCA AGAACCGCAT CCGGCCGAAA
AACGCCGTGG TGTACGCCAC GCAGTCGATC CACAAGCTGC TGGCCGGCAT CAGCCAGGCC
AGCCATGTCT TGGTGCAGGA TTCGCAGAAC GTCAAGCTCG ACAGGCACCT GTTCAACGAG
GCCTACCTGA TGCACACCTC GACCTCGCCG CAGTACAGCA TCATTGCCAG CTGCGACGTG
GCCGCCGCCA TGATGGAGCC GCCCGGCGGC ACCGCGCTGG TCGAGGAAAG CATTGCCGAG
GCGCTCGATT TCCGCCGCGC CATGCGCAAG ATCGATGAGG AATATGGCGC GGACTGGTGG
TTCAAGGTCT GGGGGCCGGA CAAGCTGGTG GAGGAAGGCA TTGGCCGTGC CCAGGACTGG
ATCATCAAGG GCGAGTCGCG CAGCGCCAAG ACCGCAAAGA ACGGCGCGGC CAACTGGCAC
GGCTTTGGCC AGATGGCCAC CGGCTTCAAC ATGCTGGACC CGATCAAATC GACCATCGTC
ACGCCGGGGC TGGACCTGAA CGGCAAGTTT GCCAAGACCG GCATTCCGGC CAGCATCGTG
ACCAAGTTCC TGGCCGAGCA TGGCGTGATT GTGGAAAAGA CCGGCCTGTA CAGCTTTTTC
ATCCTGTTCA CCATCGGCAT CACCAAGGGC CGCTGGAACA CGCTGCTGAC CGCGCTGCAG
CAGTTCAAGG ACGACTACGA CAAGAACCAG CCGATGTGGC GCATCCTGCC CGAGTTCTGC
CAGAAGTTCC CGAAGTACGA GCGCATGGGG CTGGCCGACC TGTGCCAGCA TATTCATGCC
CTGTATGCCA AGTACGACAT TGCACGGCTG ACGACTGAGG TGTACCTGAG CGACCTGATG
CCGGCCATGA AGCCGAGCGA CGCCTACGCC CACATTGCCC ATCGCACGAC CGAGCGGGTG
GAAATCGACC ATCTGGAAGG CCGGATCACC GTCGGGCTGG TGACACCTTA CCCGCCGGGT
ATTCCGCTCC TGATTCCCGG TGAAGTGTTT AACAAGAAAA TCGTCGATTA CCTGAAGTTT
TCCCGCGAAT TCAATGCGCA GTGCCCGGGT TTCGAGACTG ACATTCATGG TCTGGTCGAG
CAGGCCGATG CGAAGGGAAA AGTCCGCTAC TACGCCGACT GCGTGAAGAA ATAA
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| Protein sequence | MPSDRFWAPS TAAYAMKFRF PIVIIDEDFR SENTSGLGIR ALAQAIESEG FEVLGVTSYG
DLSQFAQQQS RASAFILSID DEEFTPGPDL DPAVLDLRNF IAEVRRKNLD VPIYVYGETK
TSRHIPNDIL RELHGFIHMF EDTPEFVARH IIREAKSYLE GVQPPFFKAL LDYAEDGSYS
WHCPGHSGGV AFLKSPVGQM YHQFYGENML RSDVCNAVEE LGQLLDHNGA IGASERNAAR
IFNADHCFFV TNGTSTSNKM VWHHTVAPGD VVVVDRNCHK SILHAIIMTG SIPVFLKPTR
NHFGIIGPIP QSEFEPEAIR AKIAANPLLK GVDAATVKPR VLTLTQSTYD GVLYNTETIK
GMLDGYIDNL HFDEAWLPHA AFHPFYGTYH SMGKNRIRPK NAVVYATQSI HKLLAGISQA
SHVLVQDSQN VKLDRHLFNE AYLMHTSTSP QYSIIASCDV AAAMMEPPGG TALVEESIAE
ALDFRRAMRK IDEEYGADWW FKVWGPDKLV EEGIGRAQDW IIKGESRSAK TAKNGAANWH
GFGQMATGFN MLDPIKSTIV TPGLDLNGKF AKTGIPASIV TKFLAEHGVI VEKTGLYSFF
ILFTIGITKG RWNTLLTALQ QFKDDYDKNQ PMWRILPEFC QKFPKYERMG LADLCQHIHA
LYAKYDIARL TTEVYLSDLM PAMKPSDAYA HIAHRTTERV EIDHLEGRIT VGLVTPYPPG
IPLLIPGEVF NKKIVDYLKF SREFNAQCPG FETDIHGLVE QADAKGKVRY YADCVKK
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