| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2019 |
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| Symbol | |
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| ID | 4689180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2146979 |
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| End bp | 2147866 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639835027 |
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| Product | DNA ligase |
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| Protein accession | YP_982249 |
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| Protein GI | 121604920 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGAC GTTTTTTCCT GTCCTTGGTC GGCCTGACCC TTGCAGGCTC GCTGCGGCCT
GCGGTGGCTG GCACGCCTGT TGCGCTTGCG TCGCCGCCGT CATCAGTGCC TTCATTGATG
CTGGCCAATG TGTACCGCTC CGGCATCGTT CTGGCCGATT ACTGGGTCAG CGAAAAATTC
GACGGGGTGC GCGGCTACTG GGATGGCCAG GCCCTCTGGA CACGCGGCGG CGAGCGCGTT
GCAGCCCCTG CCTGGTTCAC GGCGGGCTGG CCCAACGTGG CGATGGATGG CGAACTCTGG
GCGGGCCATG GGCAGTTCCC CAAGGCGGTT TCCACCGTGC GCCAGCAAAC ACCCGATGAT
GCAGCCTGGC GCAGCATGCG CTTCATGGTG TTTGACCTGC CCGCGCACGG CGGCCCGTTC
ACCGAACGGA TTCCGGCCCT CAATGGCGTG GTCAGCCGGA TTGACCAGCA CTGGGTGCAG
GCCGTGGAGC AGTTCAAGGT GGCAAGCCCC CAGGCGCTGC AGACCCTGCT GTCCAAAACC
GTGAAAAACG GCGGCGAAGG ACTGATGCTG CATCGCGGCG CTTCGCTGTA CAAGGGCCAG
CGCAATGACG ACCTGCTCAA GCTCAAGACG CACGACGACA GCGAGGCACG CGTCGTGGCT
CATGTTCCGG GCCAGGGCAA ATACGCCGGC AAGCTGGGCG CGCTGCTGGT GGAAATGCCG
GCGGCTGACG GAAAGCCGGC GCAGCGCTTC AAGCTCGGCA CCGGCTTTAG CGATGCCCAG
CGGCAAAATC CGCCGGCCGT CGGCACGCGC ATCACCTACC GATTCAGGGG CCTGAACGAC
AGCGGCATTC CGCGCTTCGC CAGCTTCATG CGGGTACGCG AAGACTGA
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| Protein sequence | MQRRFFLSLV GLTLAGSLRP AVAGTPVALA SPPSSVPSLM LANVYRSGIV LADYWVSEKF
DGVRGYWDGQ ALWTRGGERV AAPAWFTAGW PNVAMDGELW AGHGQFPKAV STVRQQTPDD
AAWRSMRFMV FDLPAHGGPF TERIPALNGV VSRIDQHWVQ AVEQFKVASP QALQTLLSKT
VKNGGEGLML HRGASLYKGQ RNDDLLKLKT HDDSEARVVA HVPGQGKYAG KLGALLVEMP
AADGKPAQRF KLGTGFSDAQ RQNPPAVGTR ITYRFRGLND SGIPRFASFM RVRED
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