| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2017 |
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| Symbol | |
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| ID | 4689397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2144171 |
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| End bp | 2145985 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639835025 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_982247 |
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| Protein GI | 121604918 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGATT TGATTTTTTT ACGGGCTTGG CTGGCCGTTT GCGCGCTGTG CCTTGCGCCG
GCAAGCTGGG CGGCCCACGC CTATGCCCAG TTTGGCGACA TCAAGTATCC GGCCGGCTTC
ACGCATTTCG GCTATGTCAA TCCCGCAGCC CCCAAGGGCG GCGAAATCCG CATGGTGCCG
CCGACCCGGC CAACCAATTT CGACAAGTTC AACCCGTTCA CCCTGCGCGG CACCGCGCCG
TATGGCCTGG GAATTTTGCT GATCGAAAGC CTGCTGACGG GCAATTCGGA AGAGCCGACC
ACCGCCTATG GACTGCTGGC CGATGACGTG ACGGTCGCGC CCGACAGGCT GTCGGCCACC
TTTCGCCTCA ACGAGAAGGC CCGTTTTCAC AACGGCGCGC CTGTGCTGGC CGCCGATGTG
CTGCATTCGT ACACCCAGCT GACCAGCAAG CTCGCCGCGC CGCAGTACCG CACGATTTAT
GCCGAAGTCA AGAGCGTCAC TGTGGTTTCC GAGCGCGTGG TGCGTTTTGA TTTCCTGACG
CCCAACCCCG AGTTGCCGCT GGTGGTGGGT GGCATGCCGG TGTTCAGCCG CGACTGGGGC
AAGGCCAAGC CCTTCGACAA GATCGTGTCT GAAGTGCCGA TTGGCTCGGG GCCGTACAAA
ATTGCCAGCC CGGCAATGGG GCGCGACATT ACCTATGTGC GCGATCCGGC GTACTGGGGC
AATGAGTTGC CAAGCCGCAA GGGCCAGTTC AACTTTGACC GCATCAGCTT CAAGATTTAC
CTCGACGAAA CCTCACGCTT CGAGGGGCTG AAGGCCGGCG AATTCGATTT CCTGCGTGAA
TTCATCTCGC GCAACTGGGC GCGGCAGTAC ACCGGCAAGC AGTTCACCTC GGGTGAACTG
GTCAAGCGCG CTTTTGAAAA CCGCAACCCC GGCGATTTCC AGGGCTATGT GTTCAACCTG
CGCAAGCCCA AGTTCCAGGA TGCGCGGGTG CGCAAGGCGA TTGGCCTGGC GATGGATTTC
GAGTGGATGA ACCGGCAGCT GTTCTACGGC CTGTACAAGC GCGTCAATGG CTATTTTCCC
AACAGCGAAT TCCATGCGGA AGGCCTGCCC AGGCCCGATG AACTGGCCCT GCTCGACCCC
TTGCGCGCCA GACTCAAGCC CGAAGTTTTC GGTCCCGTGC CGGTGTCGCC CAGCACCACG
CCGCCCGGCA GCCTGCGGGG CAACCTGCGC CAGGCCCAGG CGCTGCTGCG CGAGGCCGGC
TGGACGTACC GCGATGGCGC GCTGCGCAAT GCGAAGGGTG AGGCTTTCAC CATGGAATTC
CTGAACGACC AGCCTTCGCT GGTGCGCATC GTCGGGCCGT TCCAGAAGGC GCTGGAAAAG
CTCGGCATCA CCATGACCTA CCGCATCGTC GATTTCTCGC TGGGCAAGCA GAAGATGGAC
GCCTTCGATT TCGAGGTCAC GACGCTGCGC CTGCCCGGCA GCACCGCGCC CGGCGGCGAG
TTGCTCGAAT TGTTCGGCTC GAAGGCGGCC ACCACGCCGG GGTCTTCAAA TGTCTGGGGC
ATTGCCGACC CGGCCGTCGA TGCGCTGCTG CAAAAGGTCG TGACCGCCAA GACCCGGCCT
GAATTGAGCG CGGCCATGCG CGCGCTGGAC CGGGTGCTGA CCAACGGCTA TTACTCGGTG
CCGCAGTATT ACGGCGACGC CTTCCTGATC GGCTACCGGC CACGTCCTTT TGTGCTGCCA
GCCGTCATCC CGCCGTATTA CCAGCCCGAC ACCTGGGCCA TGAGCACCTG GTGGGCGTCG
CCCTCCAACA AATAG
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| Protein sequence | MRDLIFLRAW LAVCALCLAP ASWAAHAYAQ FGDIKYPAGF THFGYVNPAA PKGGEIRMVP
PTRPTNFDKF NPFTLRGTAP YGLGILLIES LLTGNSEEPT TAYGLLADDV TVAPDRLSAT
FRLNEKARFH NGAPVLAADV LHSYTQLTSK LAAPQYRTIY AEVKSVTVVS ERVVRFDFLT
PNPELPLVVG GMPVFSRDWG KAKPFDKIVS EVPIGSGPYK IASPAMGRDI TYVRDPAYWG
NELPSRKGQF NFDRISFKIY LDETSRFEGL KAGEFDFLRE FISRNWARQY TGKQFTSGEL
VKRAFENRNP GDFQGYVFNL RKPKFQDARV RKAIGLAMDF EWMNRQLFYG LYKRVNGYFP
NSEFHAEGLP RPDELALLDP LRARLKPEVF GPVPVSPSTT PPGSLRGNLR QAQALLREAG
WTYRDGALRN AKGEAFTMEF LNDQPSLVRI VGPFQKALEK LGITMTYRIV DFSLGKQKMD
AFDFEVTTLR LPGSTAPGGE LLELFGSKAA TTPGSSNVWG IADPAVDALL QKVVTAKTRP
ELSAAMRALD RVLTNGYYSV PQYYGDAFLI GYRPRPFVLP AVIPPYYQPD TWAMSTWWAS
PSNK
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