| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2016 |
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| Symbol | |
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| ID | 4689097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2143124 |
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| End bp | 2144158 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639835024 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_982246 |
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| Protein GI | 121604917 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.887108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCT ACATCCTCAA GCGCCTGCTG CTGATGATTC CGACGCTGTT CGGCGTCTTG
CTGCTGACCT TCGCCATGGT GCAGTTCGTG CCGGGCGGGC CGGTCGAGCA GATGGTGGCG
CAGCTGCAGG GCCGTGATTC GGGCGGTGAG CGCGCTGCCA GCACGGGGGC GGGCTACCGG
GGCCGGCAAG GGGTGGACGC CGAGCGCATC GAGGAAATCA AGGCGCTCTA CGGTTTCGAC
AAGCCGGTGC ATGAGCGCTT TTTCCAGATG CTGGGCCGCT TTGCCCGCTT TGATCTGGGC
AACAGCTTCT ACCAGCACAA GGATGTCTGG CAACTGGTCA AGGAAAAGCT GCCGGTGTCG
GTCAGCCTGG GGCTCTGGAC GTTTTTTCTC AGCTACCTGA TTGCCGTGCC GCTGGGCGTG
GCCAAGGCGG TCAGGGCGGG CAGCCGGTTT GACTTCGTGA CCACCCTGGT GGTGCTGGTC
GGCTATGCGA TTCCGGGCTT TGTGCTGGGC GTGGCGCTGC TGGTGGTCTT CGGCGGGCAA
TTGCAGTGGT TTCCGCTGCG TGGGCTGACC TCGGCCAACT GGGACACGCT GGGCTGGGGC
GCGCGGATCA CCGACTATCT CTGGCACATC ACGCTGCCGA TCACCGCAAT GGTGCTGGGC
AGCTTCGCCG TGACGACGGT GCTGACCAAG AACTCCTTCC TGGAGGAAAT CCGCAAGCAG
TACGTGCTGA CCGCCCGCGC CAAGGGCCTG AGCGAGCGCC AGGTGCTGTG GAAGCATGTG
TTTCGCAATG CCTTGATCCC CATCATCACC GGCTTTCCGG CGGCCTTCAT CGGCGCGTTC
TTTACCGGCT CGCTGCTGAT CGAAACCCTG TTTTCACTCG ATGGCCTGGG CCTACTCAGC
TATGAAAGCG TGATCCGGCG CGATTACCCG GTGGTGCTGG GAACGCTGTA CCTGTTTACC
CTGATTGGCC TGGTGACCAA GCTGGTCAGT GACCTTTGCT ATGTGTGGGT TGATCCTCGC
GTGAAGTTTG ATTGA
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| Protein sequence | MASYILKRLL LMIPTLFGVL LLTFAMVQFV PGGPVEQMVA QLQGRDSGGE RAASTGAGYR
GRQGVDAERI EEIKALYGFD KPVHERFFQM LGRFARFDLG NSFYQHKDVW QLVKEKLPVS
VSLGLWTFFL SYLIAVPLGV AKAVRAGSRF DFVTTLVVLV GYAIPGFVLG VALLVVFGGQ
LQWFPLRGLT SANWDTLGWG ARITDYLWHI TLPITAMVLG SFAVTTVLTK NSFLEEIRKQ
YVLTARAKGL SERQVLWKHV FRNALIPIIT GFPAAFIGAF FTGSLLIETL FSLDGLGLLS
YESVIRRDYP VVLGTLYLFT LIGLVTKLVS DLCYVWVDPR VKFD
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