| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2011 |
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| Symbol | infB |
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| ID | 4688672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2135105 |
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| End bp | 2138083 |
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| Gene Length | 2979 bp |
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| Protein Length | 992 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639835019 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_982241 |
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| Protein GI | 121604912 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.577771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.890025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGTA CCACTACCGT CGCTGAATTC GCAGCTGAAT TGAATAAATC TCCCGCTACC
CTGATCGAGC AATTGACCAG CGCAGGCGTT GCCAAGGTGC AGGCCAGCGA TCCCTTGTCG
GAATCCGACA AGCAAAAGCT GCTCGGCTAC CTGCATGCCA GCCATGGCAC GGTCGCTGCT
GACCGCAAAA AGATCACCCT GGTGAAAAAG TCAACCAGCG AGATCAAGCA GGCGGACTCA
ACGGGCAGGG CCCGAATCAT TCCCGTCCAG ACGATCAAGA AGCGCACCTT CATCAAGCGC
GATGACGGTT CTGACATGCC GGTTGAAGAA GCCCAGCCGG AAGTGCTGGT CGCGCCGCAG
GTTCAGGCCG CAGCAGATGC CGAACTGGTC CGCCGCGAAG ACGAAGCTAA CCGCCATGCC
GAGTTGTTGC GCCGCCAGGA AGCAGAACTG ACGGAAAAGC GCCGCTTGCG TGATGAGCAG
GCCGCGCAGG AAGCGGCCCG TGAGCGCGAA CGTGAAGCGG CGGCGCAAAA AGCGCAGGCC
GAAGCGGTGG CCCAGGCGGC GGCAGCTGCA CAAGCGGCTG CCCTGGCCGC AGAGGCGGCG
AAAAAAGTCA AGCCTACGAT TGGTAAAATC TTCAAACCGG CTCCGGTAGC CCCAACGGCT
CCGGCCATTA CGGTGGAAGC ACAAAAAGTG ATTGATACAG CTGCTGCAGA AAAGACCAGC
AAGGCCGCCG AAGCCGCCAC TGCGAAAGCG GCTGAAACCG CTTCTTTGCA GGCCGCCGCC
AAAGCCAAGG CCACCGCTGA ATTCCAGGCC GATGCGGCCA AGGCCGTGGA TTTGCAGGAG
CGCCGGCGCA AGGCCGAGGC CGAAGCCGCA GGCATTCGCG CCATGCTGTC CGCACCAAAA
CGCGTGCTGG TTCCGCATGT GGACCCGAAG ATTGCGATGA AGGGTACGCT GCACAAGCCG
GTCGTGGCCC CGGGTGCCGC AAAGCCTGCC GTTCCTGCCG CTGCTGCACC CGCAGCTCCG
GGGGCCGCTG GCAAGAAGGA AGTCAAGTCC GAGAACCTGT CTTCGACCTG GAAAGATGAC
GCCGCCAAGA AAAAAGGCAT CCCGAGCCGT GGCGCTCCGG TGGTGCCCGG TCGCGGCAAT
TTCCGCGCCG GCCCGCGTGG CCGTCGCAGT TCGGGTCGCG ATGTGCGTCC GGAGTCAAAT
TTTGTCGCAC CGACCGAATT CAAGGTGCTT GAGGTCCATG TGCCGGAAAC CATCACGGTG
TCCGAACTGG CCCACAAGAT GAGCATCAAG TCGTCCGAGG TCATCAAGCA TTTGATGAAA
CTGGGCCAGA TGGTCACCAT CAACCAGCCG CTGGACCAGG ACACCGCCAT GATCGTGGTG
GAAGAAATGG GCCATACCGC ACTGACCGCC GCGCTGGACG ATCCGGAAGC CTTCACCGCT
GACGATGTGC AGGGCCAGCA GGCCGAAGCG CTGCCACGCG CACCGGTGGT CACTGTCATG
GGTCACGTTG ACCATGGCAA GACCTCGCTG CTCGACTACA TCCGACGCGC CAAGGTGGCT
TCCGGTGAAG CCGGCGGCAT TACCCAGCAT ATTGGCGCCT ACCATGTGCA AACCCCGCGC
GGCATGGTGT CCTTCCTCGA TACCCCGGGC CACGAGGCGT TCACCGCCAT GCGTGCCCGT
GGCGCGCAGG CCACCGACAT CGTGATCCTG GTGGTGGCGG CCGACGACGG CGTGATGCCG
CAGACCAAGG AAGCCATCAA GCATGCCCGT GCTGCCGGCG TTCCCATCGT CGTGGCGATC
AACAAGATCG ACAAACCCGG CATCAACCTG GAGCGCGTCA AGGGCGAACT GGTCACCGAA
GGCGTCGTGC CCGAAGAGTT CGGCGGCGAT TCGCCATTCG TGCCCGTCTC GGCCCATACC
GGCGCAGGCA TTGACGACCT GCTGGAGCAG GTGCTGCTGC AGGCCGAAGT GCTCGAACTC
AAGGCATCGG TTGACTCGTT GGCCAAGGGC CTGGTGATTG AAGCGCGCCT TGACAAGGGC
CGCGGTCCGG TCGCCACCGT GCTGGTTCAG TCCGGTACGC TGAAGGCCGG CGATGTGGTG
CTGGCGGGTT CGACCTATGG CCGCGTGCGC GCCATGCTCG ACGAAAACGG CAAGCCGATC
AAGACCGCCG GTCCTTCGAT TCCGGTCGAA ATCCAGGGTC TGACGGAAGT GCCGCAGGCC
GGCGACGACT TCATGGTCAT GACGGACGAA CGCCGTGTGC GCGAAATCGC CACCTACCGC
GCAGGCAAGT TCCGCAATAC CAAGCTGGCC AAGCAACAGG CGTCCAAGCT GGAGAACATG
TTCTCCGACA TCAACGCCGG CGAAGTCAAG ATGCTGCCGA TCATCATCAA GGCCGATGTG
CAGGGTTCGC AGGAAGCGCT GGCGCAGTCG CTGCTCAAGC TCTCGACCGA CGAGGTCAAG
GTGCAGCTGG TGTACTCTGG CGTGGGCGGT ATTTCCGAGT CCGATGTGAA TCTGGCCATT
GCTTCGAAGG CGGTTCTGAT CGGGTTCAAT ACCCGGGCTG ACGCTCAGGC GCGCAAACAG
GCCGAGAACA ACGGCATTGA TATTCGCTAC TACAACATCA TTTATGACGC TGTGGACGAA
CTCAAGGCCG CCATGTCCGG CATGCTCACA CCCGACAAGA AGGAAGAAAT CATCGGCAAT
GCCGAGATTC GCAATATCTT CAAGGTCAGC AAGATTGGTT CGATTGCCGG TTGTATGGTC
ACTGCCGGTG TGGTTCGCCG CACCGCCAAG GTGCGTTTGC TGCGCGGCAA CGTGGTCATC
TTCACCGGTG AACTCGACTC GCTCAAGCGT TTCAAGGACG ATGCCAAGGA AGTCAAGGAA
GGCTTCGAGT GCGGCTTGAA CCTGAAGAAC TACAACGACA TCGAAGTCGG TGACATTCTG
GAGTTCTTCG AAATCAAGGA AGTCGCCCGG ACCTTGTAA
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| Protein sequence | MSSTTTVAEF AAELNKSPAT LIEQLTSAGV AKVQASDPLS ESDKQKLLGY LHASHGTVAA
DRKKITLVKK STSEIKQADS TGRARIIPVQ TIKKRTFIKR DDGSDMPVEE AQPEVLVAPQ
VQAAADAELV RREDEANRHA ELLRRQEAEL TEKRRLRDEQ AAQEAARERE REAAAQKAQA
EAVAQAAAAA QAAALAAEAA KKVKPTIGKI FKPAPVAPTA PAITVEAQKV IDTAAAEKTS
KAAEAATAKA AETASLQAAA KAKATAEFQA DAAKAVDLQE RRRKAEAEAA GIRAMLSAPK
RVLVPHVDPK IAMKGTLHKP VVAPGAAKPA VPAAAAPAAP GAAGKKEVKS ENLSSTWKDD
AAKKKGIPSR GAPVVPGRGN FRAGPRGRRS SGRDVRPESN FVAPTEFKVL EVHVPETITV
SELAHKMSIK SSEVIKHLMK LGQMVTINQP LDQDTAMIVV EEMGHTALTA ALDDPEAFTA
DDVQGQQAEA LPRAPVVTVM GHVDHGKTSL LDYIRRAKVA SGEAGGITQH IGAYHVQTPR
GMVSFLDTPG HEAFTAMRAR GAQATDIVIL VVAADDGVMP QTKEAIKHAR AAGVPIVVAI
NKIDKPGINL ERVKGELVTE GVVPEEFGGD SPFVPVSAHT GAGIDDLLEQ VLLQAEVLEL
KASVDSLAKG LVIEARLDKG RGPVATVLVQ SGTLKAGDVV LAGSTYGRVR AMLDENGKPI
KTAGPSIPVE IQGLTEVPQA GDDFMVMTDE RRVREIATYR AGKFRNTKLA KQQASKLENM
FSDINAGEVK MLPIIIKADV QGSQEALAQS LLKLSTDEVK VQLVYSGVGG ISESDVNLAI
ASKAVLIGFN TRADAQARKQ AENNGIDIRY YNIIYDAVDE LKAAMSGMLT PDKKEEIIGN
AEIRNIFKVS KIGSIAGCMV TAGVVRRTAK VRLLRGNVVI FTGELDSLKR FKDDAKEVKE
GFECGLNLKN YNDIEVGDIL EFFEIKEVAR TL
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