| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2005 |
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| Symbol | smpB |
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| ID | 4688854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2128979 |
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| End bp | 2129536 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639835013 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_982235 |
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| Protein GI | 121604906 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0231332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.713632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCACCA AAGAAGCATC CACCTCCAAA AAACCAGCCG CAGCCTCTTC CGGAAAACCG
ACAGGAAAAC CCGCCAGCAA TCTTTCGCCA AAAGCCGCAG CCGCCGCCAT CCGCATTGCC
GACAACAAGA AAGCCACGTT CAACTACCAC ATTGAAGAGC GCTTTGAAGC GGGCATGGTG
CTCGAAGGCT GGGAAGTCAA GTCGGTGCGC GAAGGCAAGG TGCAACTCAC CGACGGCTAT
GTGGTGATCC GCAACGGCGA GCTGTTCATC ATCGGCTGCC AGATCAACCC GCTGGGCACG
GCCTCGACGC ATATCCGGCC TGACTCGGTG CGCACCAAGA AGCTCTTGAT GCACAAGGAC
GAGATTCGCC GCCTGATTGG AAAGATTGAC CAGAAGGGCT TCACGCTGGT GCCGCTGAAC
ATGCACTGGA AGGCCGGCAA GGTGAAGTGC GAGATCGGCC TGGCCAAGGG CAAGGCCGAG
CACGACAAGC GCGACACCAT CAAGGACCGC GAGGGCAAGC GCGAAGTGGA CCGCGCGATG
AAATCCAGGA ACCGCTAA
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| Protein sequence | MATKEASTSK KPAAASSGKP TGKPASNLSP KAAAAAIRIA DNKKATFNYH IEERFEAGMV
LEGWEVKSVR EGKVQLTDGY VVIRNGELFI IGCQINPLGT ASTHIRPDSV RTKKLLMHKD
EIRRLIGKID QKGFTLVPLN MHWKAGKVKC EIGLAKGKAE HDKRDTIKDR EGKREVDRAM
KSRNR
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