Gene Pnap_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2000 
SymbolguaA 
ID4688797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2124230 
End bp2125852 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content61% 
IMG OID639835008 
ProductGMP synthase 
Protein accessionYP_982230 
Protein GI121604901 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.388201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACC AAAAAATCCT CATTCTCGAT TTCGGCTCCC AGGTCACCCA GCTGATTGCC 
CGGCGGGTGC GCGAAGCCCA TGTTTTCTGC GAAGTCCATC CTTGCGATGT GAGCGACGAC
TGGATTCGCG ACTACGCCAA GGATGGCAAC CTCAAGGGCA TCATCCTGTC CGGCAGCCAC
GCCAGCATCT ATGAAGAAAC GACAGACAAG GCACCGCAAG TGGTGTTTGA ACTGGGTATT
CCGGTGCTGG GCATCTGCTA CGGCATGCAG GCCATGGCGC ACCAGCTGGG TGGCAAGGTT
GAGAGCGGCC ACAAGCGCGA ATTCGGCCAT GCCGATGTGC GTGCCCGTGG CCACACGGCA
CTGCTCAAGG ACATTGCCGA CTTCACCACG CCCGAAGGGC AGGGCATGCT CACGGTCTGG
ATGAGCCATG GTGACAAGGT CACGGAAATG CCGCCGGGCT TCAAGATCAT GGCCTCTACC
TCCAGCTGCC CGATTGCCGG CATCGCTGAC GAAGAGCGAC GCTTCTACGG CGTGCAGTTC
CACCCTGAAG TCACGCATAC CAGGCAGGGG GCGGCAATCC TCAATCGCTT TGTGCTGGGC
ATCTGCGGCA CCCGGCCCGA TTGGGTCATG GGCGACTACA TCAGCGAAGC AGTCGAGAAG
ATTCGCCAGC AAGTCGGCGA TGAAGAAGTC ATCCTGGGGT TGTCGGGCGG CGTCGATTCA
TCGGTGGCTG CGGCGCTGAT TCACCGCGCC ATCGGCGACC AGCTGACCTG CGTGTTTGTC
GATCATGGTC TGCTGCGCCT GAACGAGGGC GACATGGTGA TGGAGATGTT TGTCGGCAAG
CTGCACGCCA AGGTGATTCG CGTCGATGCC GCCGAGCAGT TCCTGGGCCA CCTCGCCGGC
GTGAGCGACC CGGAGGCCAA GCGCAAGATC ATCGGCCGCG AGTTCGTCGA AGTGTTCAAG
GCCGAGGCCG CGCGGCTCAA GGCCGGGCTG GATGGCGCCT ACAAGGGCGC GAAATGGCTG
GCCCAGGGAA CGATTTACCC AGACGTGATC GAGTCGGGCG GTGCCAAGAG CAAGAAAGCT
GTTTCCATCA AGAGCCATCA CAATGTCGGC GGCCTGCCTG AGCAACTGGG CCTGAAGCTG
CTCGAACCCC TGCGCGAACT GTTCAAGGAC GAAGTGCGCG AACTGGGCGT GGCGCTGGGC
TTGCCGCACG ACATGGTCTA TCGCCATCCC TTCCCTGGGC CGGGCCTGGG CGTGCGGATT
CTGGGTGAAG TCAAGAAAGA CTATGCCGAC CTGCTGCGCC GGGCCGACGC GATCTTCATC
GAAGAACTGC GCAACTTCAA GGATGCCGAA ACCGGCAAAA CCTGGTACGA CCTGACCAGC
CAGGCGTTCA CGGTGTTTCT GCCGGTGAAA AGCGTCGGCG TGATGGGCGA TGGCCGCACC
TATGAATACG TGGTGGCCTT GCGCGCGGTG CAAACCAGCG ACTTCATGAC CGCCGACTGG
GCCGAACTGC CTTATGCGCT GCTTAAAAAA GTGTCGGGCC GAATCATCAA TGAAGTGCGC
GGCATCAACC GCGTGACCTA CGATGTCAGC AGCAAGCCGC CAGCGACGAT TGAGTGGGAG
TAG
 
Protein sequence
MQHQKILILD FGSQVTQLIA RRVREAHVFC EVHPCDVSDD WIRDYAKDGN LKGIILSGSH 
ASIYEETTDK APQVVFELGI PVLGICYGMQ AMAHQLGGKV ESGHKREFGH ADVRARGHTA
LLKDIADFTT PEGQGMLTVW MSHGDKVTEM PPGFKIMAST SSCPIAGIAD EERRFYGVQF
HPEVTHTRQG AAILNRFVLG ICGTRPDWVM GDYISEAVEK IRQQVGDEEV ILGLSGGVDS
SVAAALIHRA IGDQLTCVFV DHGLLRLNEG DMVMEMFVGK LHAKVIRVDA AEQFLGHLAG
VSDPEAKRKI IGREFVEVFK AEAARLKAGL DGAYKGAKWL AQGTIYPDVI ESGGAKSKKA
VSIKSHHNVG GLPEQLGLKL LEPLRELFKD EVRELGVALG LPHDMVYRHP FPGPGLGVRI
LGEVKKDYAD LLRRADAIFI EELRNFKDAE TGKTWYDLTS QAFTVFLPVK SVGVMGDGRT
YEYVVALRAV QTSDFMTADW AELPYALLKK VSGRIINEVR GINRVTYDVS SKPPATIEWE