| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1997 |
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| Symbol | |
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| ID | 4688763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2122054 |
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| End bp | 2123289 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639835005 |
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| Product | CMP/dCMP deaminase, zinc-binding |
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| Protein accession | YP_982227 |
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| Protein GI | 121604898 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG0590] Cytosine/adenosine deaminases
[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.382734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATG AAGCCTTTAT GGAGATGGCC CTTGTGCAAG CCCGGGTAGC GGCTGCTTTC
GGGGAAGTTC CGGTGGGTGC AGTGGTCGTC CGGCAGGGCA AGGTGATTGC CACTGGCCGC
AACGCACCGG TTGAGGCCCA TGATCCGACG GCCCATGCCG AGATCATGGC CTTGCGCGCC
GCAGCGCTGG CCTTGGGCAA CTACCGTCTT GACGAGTGCG AACTGTTTGT CACGCTGGAG
CCCTGTGCCA TGTGCAGCGG CGCCATGCTC AACGCCCGGC TCAAACGCGT GGTGTTTGGG
GCGTCTGAAC CCAAAACTGG AGCTGCCGGC TCGGTCATCA ACCTGTTTGC GCAAGCGCGG
CTGAACCACC AGACCGAATT GCAGGGCGGG GTGCTGGCCG AATCTAGCCG CGCATTGCTG
CAGGACTTTT TTCGCCAGCG CCGTGCTGAC CAGCGCGAGG CGGCCCGGCA GCGTCATCCG
CTGCGCGATG ATGCGCTTCG AACCCCTGAC GCGGCTTTTG ACGGCTTGAG CGCTTATCCA
TGGGCGCCGC GTTACCTGAG CGATCTGCCG GCCCTTGACG GCTTGCGGAT GCATTATCTT
GATGAACAGG CGCTTGGCGT GGAGGAGGGC GGCGGGCCGC GCCTGACCTA CCTTTGCCTG
CATGGCAGCC CGGACTGGAG CTATGCTTTT CGCCGGCTGA TCCCGTCCTT GCTGCAGACT
GGTCACCGGG TGGTTGCGCC GGACCTGATT GGTTTTGGCA AAAGCGACAA GCCCAAGAAG
GACAGTTTTC ATACCTTCAG CCGGCATCGC CAGATACTGC TTGAGCTGGT GGAAAAGCTG
GATCTGCAGA ACATCGTGCT GGTGCTGCCC AGACAGGGCA CTTTGCTTGG ATTGACCTTG
CCCCTGGCTG CGCCGCTGCG CTACCGAGGA TTGCGGCTCA TGAACCCCGA TCCATTGGCA
GAGAGTGAAT ACCTGCCGCT AAGCCAGGGG TTTTTGCTGT GGGAGCAAGC AGGCGGCATG
CCGGCAGGTA CTGAAACCGA TGTCGCTTGT GAAGCGCCAT TTCCCGGCAA CAGCTACCGC
GCCGGAGTGC GTGCGTTTGC TGCCATGGCA CCAGATTCCG GAAATCACGA CGGCATTGCA
TCTGAAGCCG GGCAGTTCTG GCGTGATCGC CGCGATGAAT GTAATTTACA CGTTAGTTTT
TTAGAAAAAT ATACGAACAA ACCGTATCAA GAATAG
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| Protein sequence | MSDEAFMEMA LVQARVAAAF GEVPVGAVVV RQGKVIATGR NAPVEAHDPT AHAEIMALRA
AALALGNYRL DECELFVTLE PCAMCSGAML NARLKRVVFG ASEPKTGAAG SVINLFAQAR
LNHQTELQGG VLAESSRALL QDFFRQRRAD QREAARQRHP LRDDALRTPD AAFDGLSAYP
WAPRYLSDLP ALDGLRMHYL DEQALGVEEG GGPRLTYLCL HGSPDWSYAF RRLIPSLLQT
GHRVVAPDLI GFGKSDKPKK DSFHTFSRHR QILLELVEKL DLQNIVLVLP RQGTLLGLTL
PLAAPLRYRG LRLMNPDPLA ESEYLPLSQG FLLWEQAGGM PAGTETDVAC EAPFPGNSYR
AGVRAFAAMA PDSGNHDGIA SEAGQFWRDR RDECNLHVSF LEKYTNKPYQ E
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