| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1991 |
|---|
| Symbol | |
|---|
| ID | 4688209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 2114995 |
|---|
| End bp | 2116071 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639834999 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_982221 |
|---|
| Protein GI | 121604892 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACTT CTGTTGTAGA AAATATTCCA ACTACCCCTG CTTTGCAGGT CGCAGTGCTT
GGTGATGCAG CCCAGCGCGC GGTTGATGAC TTGCTGCGCG AAGGTGAATC CTTCAACACC
ATGACCAGCT ACCGCAGTGC GCTGCGGTAT TGGGCGGCCT GGCATTTGAT GCGTTATGGC
GGCCCAATCC AGCTGCCAAT GCCTGTTCCT TGCTTATTGC AGTTCATCGT TGACCATGCC
GAGCGCATGA CGGACAAAGG CTTGCTCTCG GAGTTGCCCG CAGCCATCGA TCTGGCGCTG
GTTGACGCAG GCTACAAAGG AAAACCGGGG CCATTGGCGC ATAGCACGCT GATACATCGC
ATTGCCGTTC TGTCCAAGGC GCACCAGCTG CGCGAACTGG CCAACCCTTG CCACGATCCC
AAGGTTCGGG AGTTGCTGTC GCGCACGCGC AAGGCTTACG CCAGGCGCGG CGTTCTGCCC
AACAAAAAAG ATGCGTTGAC CAAAGACCCG CTTCAGGCAA TTTTGGCGAG TTGCGATGAC
ACGCTGCGCG GCAGGCGTGA CCGTGCCTTG CTGCTTTTTG CCTGGTCCAG CGGCGGGCGG
CGGCGCTCTG AAGTCGCCAA CGCCGACATG AAGTTTTTGA AACGCGTTGC AGACGGGTTT
ACTTACACCC TGGTCCACTC GAAAACCAAC CAGGCGGGGC TGCAGCGACC GGAAAATGAC
AAGCCCTTGC TTGGCGCTGC AGCAACCGCG TTGACCGCGT GGCTGAGCGC GTCCGGAATT
GTTGAAGGCC CCATTTTTCG GCAGGTGCGC AAAGGAGGAC AGCTTGGCGC CGCACTGGCA
GCTGCTGCCG TGCGTGACAT TGTGAAATAC CGATGCGCGC TGGTGGGCAT TGAAGGGGAT
TTTTCGGCCC ATTCGCTTCG CTCCGGCTTT GTCACGGAGG CGGGTCGGCA AAACATGTCC
TTGGCTGAAA CCATGGCGAT GACGGGTCAC CACAGCGTAG CGACTGTAAT GGGTTATAGC
CGTGCGGGTG CTTCACTGTC CAGCAAGGTT GCCCGCTTGT TTGATGCACC TGCCTGA
|
|---|
| Protein sequence | MLTSVVENIP TTPALQVAVL GDAAQRAVDD LLREGESFNT MTSYRSALRY WAAWHLMRYG
GPIQLPMPVP CLLQFIVDHA ERMTDKGLLS ELPAAIDLAL VDAGYKGKPG PLAHSTLIHR
IAVLSKAHQL RELANPCHDP KVRELLSRTR KAYARRGVLP NKKDALTKDP LQAILASCDD
TLRGRRDRAL LLFAWSSGGR RRSEVANADM KFLKRVADGF TYTLVHSKTN QAGLQRPEND
KPLLGAAATA LTAWLSASGI VEGPIFRQVR KGGQLGAALA AAAVRDIVKY RCALVGIEGD
FSAHSLRSGF VTEAGRQNMS LAETMAMTGH HSVATVMGYS RAGASLSSKV ARLFDAPA
|
|---|
| |