| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1989 |
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| Symbol | |
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| ID | 4688194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2112300 |
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| End bp | 2113694 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639834997 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_982219 |
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| Protein GI | 121604890 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0157211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACTC CTACGGCAAC TATTACCATG TCCATGCGCG AAACCGATCG TCTCAAGACC
GTCCAGGCTG TGGTGGACCG CATGGCGCGT GTCGGCCAGG CTGCCGAGCA ACTCGGGCTT
AGCCGACGTC AGCTTGAGCG GCTAGTTCAG CGTTACAAGC ACGACGGTGT CCAAGGGCTG
GTCTCGCGCA AACGAGGCCG CCCCAGCAAC CACCAATTGG CCCCTGGAGT CGCGCAACGC
GCCCTTGGCC TGATCCAGGC GCGTTACCCG GACTTCGGCC CGACGTTGGC CTGTGAGAAG
CTCATTGAAT GTCATGGGCT CCAGCTCAGC GTAGAGACCG TGCGAGCTTT GATGATTGCG
GCCGGATTGT GGACGCCGCG CAAACAGCGC GCAGCCAAAA TCTACCAGCC GCGCAACCGC
CGCGCCTGTG TTGGCGAACT CATCCAGATT GATGGCAGTG ATCATGCCTG GTTCGAGTCT
CGCTCGGCAC CTTGCACGCT GCTGGTGTAT ATCGATGACG CCACCAGCCG GCTGATGCAA
CTGCACTTCG TGCCCACCGA ATCGGCCTTT GCCTACTTCG AAGCCACACG CGCCTACCTT
GAGCAGCACG GCAAGCCTGT GGCGTTCTAC AGCGACAAGG CCAGCATCTT TCGCTCGGTG
CGCGACTCAA CCGACTTTGG CCGCGGAACC ACCCAGTTCG GGCGTGTGCT CTTCGAGCTG
AACATTGACA TCTGGTGCGC CAACTCCAGC CAGGCCAAGG GCCGCGTCGA GCGGGCCAAC
CTGACGCTGC AGGACCGCCT GGTCAAAGAG CTGCGCCTGC GCGGAATCAA CACGCGCGAG
GCCGCCAACG CGTTCGCACC GCACTTCATG GCCGACTTCA ACGCACGCTT TGCCAAGCCG
CCGAAAAGCC AATTCGATGC GCACCGGCCC GTGCGCGACG ATGAAGACTT GGACCTGCTG
TTTACCTGGC GGCTTCAGCG AAAGGTCTCG CAGTCTCTGA CGCTGCAGCA TGACCGGGTG
ATTTACCTGC TTAAGGACAC GCCGGTCAAC CGTTCCTTGA TTCACCGCTA TATCGATGTT
TTCGAATACC CCGACGGCCG GATTGAACTG AGGGCCGATG GCGCGAACCT GGCGTACGAA
CGCTACGACC GGTTGGCGCA GATGGACACA AGTGCGATCG TCGAAAACAA ACGACTCAGC
CACGTATTGC AGGCGGTACA GATCCTGCAG GCCCAGCGTG ATGACCGGCA CAAATCAGAT
ACCCCCTCGC GAACCAATCA GGGAAAAGCC CCGTATCGAC AAAAAGCTCA ACCGGGCACG
AAGCTCTCAA GTCAGTTCAC GCCAGAAGAC CTTGAACTTG CAGTCCTGAA AGTCTGCACA
GGGACAACAG TGTGA
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| Protein sequence | MSTPTATITM SMRETDRLKT VQAVVDRMAR VGQAAEQLGL SRRQLERLVQ RYKHDGVQGL
VSRKRGRPSN HQLAPGVAQR ALGLIQARYP DFGPTLACEK LIECHGLQLS VETVRALMIA
AGLWTPRKQR AAKIYQPRNR RACVGELIQI DGSDHAWFES RSAPCTLLVY IDDATSRLMQ
LHFVPTESAF AYFEATRAYL EQHGKPVAFY SDKASIFRSV RDSTDFGRGT TQFGRVLFEL
NIDIWCANSS QAKGRVERAN LTLQDRLVKE LRLRGINTRE AANAFAPHFM ADFNARFAKP
PKSQFDAHRP VRDDEDLDLL FTWRLQRKVS QSLTLQHDRV IYLLKDTPVN RSLIHRYIDV
FEYPDGRIEL RADGANLAYE RYDRLAQMDT SAIVENKRLS HVLQAVQILQ AQRDDRHKSD
TPSRTNQGKA PYRQKAQPGT KLSSQFTPED LELAVLKVCT GTTV
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