Gene Pnap_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1988 
Symbol 
ID4687476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2111190 
End bp2112206 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content65% 
IMG OID639834996 
Productfructose-1,6-bisphosphate aldolase 
Protein accessionYP_982218 
Protein GI121604889 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01521] fructose-bisphosphate aldolase, class II, Calvin cycle subtype 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0362683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTTA TTTCCCTTCG CCAGATGCTC GACCATGCCG CTGAAAACGG CTACGGCATT 
CCGGCCTTCA ACGTCAACAA CCTGGAGCAG ATCCAGGCCA TCATGGAAGC CGCCCAGGCG
ACCGACAGCC CGGTCATCCT GCAAGCCTCG GCCGGGGCGC GCAAGTACGC GGGCGAAGCC
TATCTGCGCC ACATGATGCT GGCGGCGGTC GAGTCGCACC CGGACATTCC GGTGGTGGTT
CACCAGGACC ACGGCACATC GCCGGCCGTG TGCATCCAGT CGATCCGCTC GGGCTTTACC
AGCGTGATGA TGGACGGTTC GCTGCTGGCC GACGGCAAGA CACCGTCCAG CTACGACTAC
AACGTGGACG TGACGCGCCG CGTCACCGAG ATGACGCATG CCGTGGGCGT GTCGGTCGAG
GGCGAACTCG GCTGCCTCGG CAGCCTGGAA ACCGGCGAAG CGGGCGAGGA AGACGGCGTG
GGCGCGGTCG GCAAGCTGAC CCACGACATG ATGCTGACCG ACCCATTGCA GGCCAGGGAT
TTTGTGCAAC AGACCGGCGT CGATGCGCTG GCGATTGCGA TTGGCACCAG CCACGGCGCC
TACAAGTTCA CCCGCAAGCC CACCGGCGAC ATCCTGGCCA TCGACCGCAT CGCCGCCATC
CATGCGCAGA TTCCCGACAC CCATCTGGTG ATGCACGGCA GTTCCAGCGT GCCGCAGGAG
TGGCTGGAAA TCATTCGCCG GTTCGGCGGC GACATCAAGG AAACCTACGG CGTGCCGGTC
GAGGAAATCC AGCGCGGCAT TCAAAGCGGC GTGCGCAAGA TCAACATCGA CACCGACATC
CGCCTGGCCA TGACCGGCGC GATGCGCCAG TTGCTGGCCG AGCAGCGTAG CGAGTTCGAT
CCACGCAAGG CGCTGCTGGC AGCCAAAAAA GCAGCCAGCA GCATCTGCAC GGCGCGCTTC
GAGGCCTTTG GCTGCGCGGG GCAGGCGTCG CGCATCAAGG CCTTGCCCAT GGGCTGA
 
Protein sequence
MAFISLRQML DHAAENGYGI PAFNVNNLEQ IQAIMEAAQA TDSPVILQAS AGARKYAGEA 
YLRHMMLAAV ESHPDIPVVV HQDHGTSPAV CIQSIRSGFT SVMMDGSLLA DGKTPSSYDY
NVDVTRRVTE MTHAVGVSVE GELGCLGSLE TGEAGEEDGV GAVGKLTHDM MLTDPLQARD
FVQQTGVDAL AIAIGTSHGA YKFTRKPTGD ILAIDRIAAI HAQIPDTHLV MHGSSSVPQE
WLEIIRRFGG DIKETYGVPV EEIQRGIQSG VRKINIDTDI RLAMTGAMRQ LLAEQRSEFD
PRKALLAAKK AASSICTARF EAFGCAGQAS RIKALPMG