Gene Pnap_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1987 
Symbol 
ID4688160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2109906 
End bp2111108 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content67% 
IMG OID639834995 
Productphosphoglycerate kinase 
Protein accessionYP_982217 
Protein GI121604888 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.246493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCC TGCGTTTTTC CGATGTCATC CAGAGCGGCT TTTGCCTGAA CAAGCGCGTC 
TTCATCCGCG CCGACCTGAA CGTGCCGCAG GACGCCAGCG GCCGCATCAC CGAGGACACC
CGCATCCGGG CGTCGCTGCC GTGCATCCGC ATGGCGCTGG ACGCTGGCGC GGCGGTCATG
GTCACCAGTC ACCTGGGCCG GCCGGCAGAA GGGGGCTTCA AGCCCGGGGA CAGCCTGGCG
CCCGTGGCTG AGCGCCTGTC CGAACTGCTG GGACGGCCGG TGTCGCTGGT CTCAAGCTGG
GTGGACGGCG TGCCGGTCGA GCCCGGCCAG CTGGTGCTGC TGGAAAACTG CCGCCTCAAT
GCCGGCGAAA AAAGCAACGA CGAGGCGCTT TCCCGCAAGC TGGCCGCGCT GTGCGATGTC
TTTGTCCATG ACGCTTTCGG CACCGCCCAC CGCGCCGAAG CCACGACCCA CGGCATCGCG
CAATTCGCGC CGATCGCCTG CGCCGGGCCG CTGCTGGCCG CTGAAATCGA TGCCATCAAC
AGCGCACTGG CCCAACCAGA ACGCCCGCTG GTCGCCATCG TGGGCGGCTC CAAGGTCAGC
TCCAAACTGA CCATTCTACA AAGCCTGGCC AGCAAGGTTG ACCAGCTCAT CGTCGGCGGC
GGCATTGCCA ACACCTTCAT GCTGGCCGCC GGCCTGAACA TCGGCAAGAG CCTGGCCGAG
CCGGGGCTGG TGGAGGAGGC CAGGGCGGTT ATTGAGGCCA TGAAGGCGCG CGGCGCCGAG
GTGCCGATTC CGACCGACGT GGTCTGCGCC AAGAGCTTTG CCGCCGACGC CGTCGCCACC
GTGAAGCAGG CGGGCGACGT GGAGGATGAC GACCTGATCC TGGACATCGG CCCCGACACC
GCCGCAAGGC TGGCAGCGCA GCTCAAGTCG GCGGGCACCA TCGTCTGGAA CGGCCCGGTC
GGCGTGTTCG AGTTCGAGGC TTTCTCGAAG GGCACCGAAG GCATCGCCCG CGCGATTGCC
GAGTCCAGCG CCTTCAGCAT TGCCGGCGGC GGCGACACGC TGGCGGCGAT TGCCCAATAC
GGCATCGAGA AAGACGTGGG CTACATCTCC ACCGGCGGCG GCGCTTTCCT GGAGGTGCTG
GAGGGCAAGA CGCTGCCGGC GTTCGAGATT CTGCAGCAGC ACGCTGAAAC ATCAGCTTTT
TGA
 
Protein sequence
MNVLRFSDVI QSGFCLNKRV FIRADLNVPQ DASGRITEDT RIRASLPCIR MALDAGAAVM 
VTSHLGRPAE GGFKPGDSLA PVAERLSELL GRPVSLVSSW VDGVPVEPGQ LVLLENCRLN
AGEKSNDEAL SRKLAALCDV FVHDAFGTAH RAEATTHGIA QFAPIACAGP LLAAEIDAIN
SALAQPERPL VAIVGGSKVS SKLTILQSLA SKVDQLIVGG GIANTFMLAA GLNIGKSLAE
PGLVEEARAV IEAMKARGAE VPIPTDVVCA KSFAADAVAT VKQAGDVEDD DLILDIGPDT
AARLAAQLKS AGTIVWNGPV GVFEFEAFSK GTEGIARAIA ESSAFSIAGG GDTLAAIAQY
GIEKDVGYIS TGGGAFLEVL EGKTLPAFEI LQQHAETSAF