| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1975 |
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| Symbol | |
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| ID | 4687491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2095169 |
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| End bp | 2096263 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639834983 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_982205 |
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| Protein GI | 121604876 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.847489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCT TTTACGAGGT GATGCGCCGC CAAGGCATAT CCCGCCGCAG TTTTTTGAAA
TACTGCTCCC TGACCGCCAC GTCCCTGGGC CTGGGCTCGT CCTTCGTGCC GCAGATCGCC
CATGCGATGG AAACCAAGCC GCGCACCCCG GTGCTGTGGC TGCATGGCCT GGAATGCACC
TGCTGCTCGG AGTCGTTCAT CCGTTCCGCG CACCCGCTGG CCAAGGATGT GGTGCTGTCC
ATGATCTCGC TCGACTATGA CGACACGCTG ATGGCCGCCG CCGGCCACCA GGCCGAGGCC
ATCCTTGAAG AAATCATGGT CAAGTACAAG GGCAACTACA TCCTGGCGGT GGAAGGCAAC
CCGCCGCTCA ATCAGGACGG CATGAGCTGC ATCATCGGCG GCAAGCCCTT CATCGAGCAG
CTCAAGCATG TGGCCAAGGA CGCCAAGGCC ATCATCTCCT GGGGCTCGTG CGCCTCCTGG
GGCTGCGTGC AGGCCGCCAA GCCCAACCCG ACCCAGGCCA CGCCGATCCA CAAGGTCATC
TTCGACAAGC CCATCATCAA GGTGCCGGGC TGCCCACCGA TTGCCGAGGT GATGACCGGC
GTGATCACCT ACATGCTGAC CTTCGACCGG ATTCCCGAGC TGGACCGCCA GGGCCGGCCC
AAGATGTTCT ACAGCCAGCG CATCCACGAC AAATGCTACC GCCGCTCCCA CTTTGACGCC
GGCCAGTTCG TCGAGAAGTT CGACGACGAG TCGGCGCGCA AGGGCTACTG CCTCTACAAG
GTCGGCTGCA AGGGACCGAC CACGTACAAC GCCTGCTCGA CCACGCGCTG GAACGAAGGC
ACGAGCTTTC CGATCCAGGC CGGCCACGGC TGCATCGGCT GCTCGGAAGA CGGCTTCTGG
GACAAGGGCT CGTTTTACGA CCGGCTGACC GGCGTGGACC AGTTCGGCAT CGAGGCCAAC
GCCGACAAGG TCGGCGGCGC TGCGGCCGGC GTCGTCGGCG CTGCTGCCGT GGCGCATGCC
GCCGTGTCGG CCATCAAGCG GGCCACGCAA AAAAGCGACA AGCCCAAGAG TGACGCGGCG
CTGTCCGATC ACTGA
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| Protein sequence | METFYEVMRR QGISRRSFLK YCSLTATSLG LGSSFVPQIA HAMETKPRTP VLWLHGLECT
CCSESFIRSA HPLAKDVVLS MISLDYDDTL MAAAGHQAEA ILEEIMVKYK GNYILAVEGN
PPLNQDGMSC IIGGKPFIEQ LKHVAKDAKA IISWGSCASW GCVQAAKPNP TQATPIHKVI
FDKPIIKVPG CPPIAEVMTG VITYMLTFDR IPELDRQGRP KMFYSQRIHD KCYRRSHFDA
GQFVEKFDDE SARKGYCLYK VGCKGPTTYN ACSTTRWNEG TSFPIQAGHG CIGCSEDGFW
DKGSFYDRLT GVDQFGIEAN ADKVGGAAAG VVGAAAVAHA AVSAIKRATQ KSDKPKSDAA
LSDH
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