| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1974 |
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| Symbol | |
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| ID | 4687192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2093280 |
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| End bp | 2095136 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639834982 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_982204 |
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| Protein GI | 121604875 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.688051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCTT ACGAAACTCA AGGCTTCAAG ATGGACAACT CCGGCCGCCG CGTGGTGGTG
GACCCGGTGA CCCGCATCGA AGGCCATATG CGCTGCGAGG TCAACCTCGA CAGCAACAAC
GTGATCCGCA ACGCGGTCTC CACCGGCACC ATGTGGCGCG GGCTGGAGGT GATTCTCAAG
GGCCGCGATC CGCGCGACGC CTGGGCGTTT GTCGAGCGCA TCTGCGGCGT CTGCACCGGC
TGCCATGCGC TGGCCTCGGT GCGCGCGGTG GAAGATGCGC TGGGCATCGT GATTCCGAAG
AACGCCTACC TGATCCGCGA GATCATGGCC AAGACGCTGC AGGTGCATGA CCATGCGGTG
CATTTCTACC ACCTGCATGC GCTGGACTGG GTCGATGTGG TGTCGGCCCT GAAAGCCGAC
CCGAAGAAAA CCTCGGAGCT GCAGCAGGCG GTGTCGCCGA GCCACCCGAT GTCCTCGCCC
GGCTATTTCC GCGACATCCA GAACCGGCTG AAGAAGTTTG TCGAAAGCGG CCAGCTCGGC
CCCTTCATGA ACGGCTACTG GGGAAGCAAG GCCTATGTGC TGCCGCCCGA GGCCAATTTG
ATGGCGGTCA CGCATTACCT CGAAGCGCTG GACCTGCAAA AGGAATGGGT CAAGATCCAC
ACCATTTTCG GCGGCAAGAA CCCGCACCCG AACTACCTGG TGGGCGGCAT GCCCTGTGCC
ATCAACCTGG ACAAGGACGG GGCTGCGGGC GCCCCGGTCA ACATGGAAAG GCTGAACTTC
ATCGAGGCGC GCATCCGGGA GATGATCGAG TTCAACAACA ACGTCTATAT TCCGGACGTG
CTGGCCATCG GCACCCTGTA CAAGAATGCC GGCTGGCTCT ACGGCGGCGG CCTGGCGGCC
ACCAACGTGA TGGACTACGG CACCTATGAA AAGGTCATGG GCGACCGCAG CACCCAGAAG
CTGCCGGGCG GCGCGATCCT GAACGGCAAC TGGGACCAGA TCCTGCCGGT CGATGTGCGC
GACCCGGAAC AGGTCCAGGA ATTCGTCACC CACAGCTGGT ACAAGTACGG CGACGAAACC
AAGGGGCTGC ACGGCTGGGA CGGCGTGACC GAGCCCAACT ACGTCCTGGG CGCCAAGACC
AAGGGCACGC GCACCAACAT CCAGGAAATC GACGAAAGCG CCAAGTACTC GTGGGTCAAG
TCGCCGCGCT GGCGCGGCCA TGCGATGGAG GTCGGGCCGT TGTCGCGCTA CATCCTGGGC
TACGCGCACG CCCAGCAGGG AAACAAGAAC TGCCAGCGGG TCAAGGAGCA GATCGACAGT
TCCGCCCAGA TCATCAACCA CACCTTCCCC AAGGCGCTGG GCATCCCGGA AACGCAGTAC
ACCGTCAAGC AGCTGATGCC GACGACGATA GGCCGGACCC TGGCGCGCGC GCTGGAGTCG
CAGTACTGCG CCGAGATGAT GATGGACGAC TTCAAGGAAA TGGTCGCCAA CATCAAGGCC
GGCGATGTTG CCACCGCCAA TGTCGAGAAA TGGGACCCGG CCACCTGGCC CAAGGAAGCC
AAGGGCGTGG GCGTGGTGGC CGCGCCGCGC GGCGCGCTCG GGCACTGGAT CAAGATCAAG
GACGGGCGCA TCGAGAACTA CCAGTGCGTG GTGCCCAGCA CCTGGAACGC GAGCCCGCGC
GACCACAAGG GCCAGATCGG CGCTTTCGAG GCCAGCCTGA TGAACACGCC GGTGGCGGAC
CCGGAGCAAC CCGTGGAAAT CCTGCGCACG CTGCATTCCT TCGATCCGTG CATGGCCTGC
TCGACCCATG TGATGAGCCC GGACGGCCAG GAACTGACCT CCGTCAAAGT CCGGTAA
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| Protein sequence | MGAYETQGFK MDNSGRRVVV DPVTRIEGHM RCEVNLDSNN VIRNAVSTGT MWRGLEVILK
GRDPRDAWAF VERICGVCTG CHALASVRAV EDALGIVIPK NAYLIREIMA KTLQVHDHAV
HFYHLHALDW VDVVSALKAD PKKTSELQQA VSPSHPMSSP GYFRDIQNRL KKFVESGQLG
PFMNGYWGSK AYVLPPEANL MAVTHYLEAL DLQKEWVKIH TIFGGKNPHP NYLVGGMPCA
INLDKDGAAG APVNMERLNF IEARIREMIE FNNNVYIPDV LAIGTLYKNA GWLYGGGLAA
TNVMDYGTYE KVMGDRSTQK LPGGAILNGN WDQILPVDVR DPEQVQEFVT HSWYKYGDET
KGLHGWDGVT EPNYVLGAKT KGTRTNIQEI DESAKYSWVK SPRWRGHAME VGPLSRYILG
YAHAQQGNKN CQRVKEQIDS SAQIINHTFP KALGIPETQY TVKQLMPTTI GRTLARALES
QYCAEMMMDD FKEMVANIKA GDVATANVEK WDPATWPKEA KGVGVVAAPR GALGHWIKIK
DGRIENYQCV VPSTWNASPR DHKGQIGAFE ASLMNTPVAD PEQPVEILRT LHSFDPCMAC
STHVMSPDGQ ELTSVKVR
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