Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1973 |
Symbol | |
ID | 4687468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2092648 |
End bp | 2093238 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639834981 |
Product | HupE/UreJ protein |
Protein accession | YP_982203 |
Protein GI | 121604874 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2370] Hydrogenase/urease accessory protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.374971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAC TCAATTCCCG GCGCCTGGCC ACTGCTGCTG CGCTGGTGCT GGCCGCCGGT GCGGCCCAGG CCCATCCGGG TCACGGCGCG GCAGGCTTTG CCGACGCGCT GGCCCATCCC TTCATGGGGC TGGACCATCT GCTGGCCATG GTGGCCGTCG GCGCCTGGTC GGTGGCGGCC TTGCCTGCCG GGCGCCGGCT GGCTGGCCCG GCGGTCTTTT TGCTGATGCT GCTGGCCGGC GTGGCGCTGG CCTGGTCGGG TGTCATGCTG CCCGGCGTCG AAGCCGGCGT GGCCATCAGT GTGACGCTGT TTGGCGTCAT GCTGCTGGCA GGCCGCCGCC TGCCGGCTGT GCCCGGCCTG CTGATGGTCG GCGCGGCAGC CTTGCTGCAT GGCAGCGCGC ACGGCAGCGA ACTGGTTCCG GGCACCGACA TGCTGGTCAC GGCATCGGGC ATCGCGGTCG CCTCGGCGGC GCTGCATGCG CTGGGCTTGA TGGCTGGCAT CCGGCTGCAG GCGATGGGGT CATGGGCCAC GCAGCTGGCA GCGGCGCTGC TGGGCAGTTC GGGCCTGGTG ATGCTGGCCA CGCGGTTGTA A
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Protein sequence | MLKLNSRRLA TAAALVLAAG AAQAHPGHGA AGFADALAHP FMGLDHLLAM VAVGAWSVAA LPAGRRLAGP AVFLLMLLAG VALAWSGVML PGVEAGVAIS VTLFGVMLLA GRRLPAVPGL LMVGAAALLH GSAHGSELVP GTDMLVTASG IAVASAALHA LGLMAGIRLQ AMGSWATQLA AALLGSSGLV MLATRL
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