Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1972 |
Symbol | |
ID | 4687224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2091892 |
End bp | 2092632 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639834980 |
Product | Ni/Fe-hydrogenase, b-type cytochrome subunit |
Protein accession | YP_982202 |
Protein GI | 121604873 |
COG category | [C] Energy production and conversion |
COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.184335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGCCA CCCCTTTACC CCTTGCGCCC ACGCCGTCAG GCGATGCGGA TTTCGATGCG ATGGAGGTCG CCAGAGCCAG GTCCATCAAG TCGGTCTATG TCTATGAAGC CCCGGTCCGC GTCTGGCACT GGATCAATGC CCTGGCCATC ACGGTGCTGG GCGTCACCGG CTACTTCATC GGCTCGCCGC TGCCGACCAT GCCCGGCGAG GCCAGCGACC ACTTCGTGAT GGGCTACATC CGGTTTGCCC ACTTTGCCGC CGGCTATCTG CTGGCCATCG GCCTGCTCGG GCGCATCTAC TGGGCCATCG TGGGCAACCA CCATGCCCGG GAAATGTTCT GGGTGCCGAT TTTCCAGCGC GCCTACTGGG TCGAAGTGCT GGGCATGCTC AAGTGGTATG CCTTCCTCAC CGAGCGTCCG GGCCGCTATG TCGGGCACAA CCCGCTGGCC CGCTTTGCCA TGGTCTTCAG CTTTTTGCTG ACGGCCGTGT TCATGGTGCT GACCGGGTTC GCCCTGTATG CGGAGGGATC GCAGGCCGGC TCGTGGCAGG ACAAGGCGTT CGGCTGGATC ATTCCGCTGT TCGGCCAGTC GCAGGATGTG CATACCCTGC ATCACCTCGG TCTGTGGGTG CTGCTGTCGT TCGTGATTGT CCACGTCTAT GCGGCCATCC GCGAGGACAT CATGGGGCGC TCAAGCGTCA TCAGCACCAT GATCTCGGGC TACCGCACGT TCAAGGACTG A
|
Protein sequence | MSATPLPLAP TPSGDADFDA MEVARARSIK SVYVYEAPVR VWHWINALAI TVLGVTGYFI GSPLPTMPGE ASDHFVMGYI RFAHFAAGYL LAIGLLGRIY WAIVGNHHAR EMFWVPIFQR AYWVEVLGML KWYAFLTERP GRYVGHNPLA RFAMVFSFLL TAVFMVLTGF ALYAEGSQAG SWQDKAFGWI IPLFGQSQDV HTLHHLGLWV LLSFVIVHVY AAIREDIMGR SSVISTMISG YRTFKD
|
| |